GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:00:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nineta flava genome assembly, chromosome: 4.
OY986043.1:63814903-63814922
ATAATTGAATATTTAAAAATGGTGGTTGAA63814903CGTTGAATCGAATCCTTCGTGCTCGTGTCAAATGTATTAACCACTCGCTT
EST1234856 ESTSYN-L Musa acuminata AAA Group cDNA clone pESTSYNL-3N10 5', mRNA sequence.
ES434650.1:671-690
ATCCTCTTTTTTAGTCCTTCCTGTGTAAAG671ACGAAGGATTCGATTCAACGAAGCAAATCATTCTTTTGGCCTGATCCA
TSA: Musa acuminata AAA Group Unigene80614_NK1 mRNA sequence.
JV394189.1:37-56
ATCCTCTTTTTTAGTCCTTCCCGTGTAAAG37ACGAAGGATTCGATTCAACGAAGCAAATCATTCTTTTGGCCTGATCCAAT
Musa acuminata subsp. malaccensis isolate AA chromosome 7.
CP126376.1:33358972-33358991
ATCCTCTTTTTTAGTCCTTCCTGTGTAAAG33358972ACGAAGGATTCGATTCAACGAAGCAAATCATTCTTTTGGCCTGATCCAAT
Musa acuminata subsp. malaccensis isolate AA chromosome 18.
CP126387.1:33188424-33188443
ATCCTCTTTTTTAGTCCTTCCTGTGTAAAG33188424ACGAAGGATTCGATTCAACGAAGCAAATCATTCTTTTGGCCTGATCCAAT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A07.
HG996473.1:34254088-34254107
ATCCTCTTTTTTAGTCCTTCTAGTGTAAAG34254088ACGAAGGATTCGATTCAACGAAGCAAATCATTCTTTTGGCATGATCCAAT
Tiphia femorata genome assembly, chromosome: 5.
OX090899.1:9645643-9645662
CTGGACATTTGCCAAAGGCTGTACTGGCCC9645643ACGAAGGATTCGATTCAACGTCTGGCCAAAGTTCGGGGAAATCTTTTTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTTGAATCGAATCCTTCGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTTGAATCGAATCCTTCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTGAATCGAATCCTTCGT&k=0&no_gap=0&offset=0&limit=50
0.187 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=ACGAAGGATTCGATTCAACG&k=0&no_gap=0&offset=0&limit=49
0.191 | 0.004 | cgi_end;

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