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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 15:47:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:1128190-1128209
TTAGTGAGATTTGACGGAGTATTGACTGGA1128190CGTTGACGGTGTTTGATTTGATGAATTGGAATGCGGTGGCGGCGAGGGAT
Sequence 136746 from Patent WO2008034648.
FB917473.1:285-304
ATCCATGGCTGCCACCGCATTCCAGTTCAT285CAAATCAAACACCGTCAACGTCGAGTCAAAACTCCGTCAAATCTCACTAA
Sequence 136746 from Patent EP2090662.
HB787532.1:285-304
ATCCATGGCTGCCACCGCATTCCAGTTCAT285CAAATCAAACACCGTCAACGTCGAGTCAAAACTCCGTCAAATCTCACTAA
NF034D03ST1F1000 Developing stem Medicago truncatula cDNA clone NF034D03ST 5', mRNA sequence.
AW690436.1:284-303
AAGCAGAGCCGCCACCGCATTCCATTTCAT284CAAATCAAACACCGTCAACGTCCAATCAAAACTCCGTCAAATCACCCAAA
NF095B06ST1F1048 Developing stem Medicago truncatula cDNA clone NF095B06ST 5', mRNA sequence.
AW695468.1:239-258
AAGCAGAGCCGCCACCGCATTCCATTTCAT239CAAATCAAACACCGTCAACGTCCAATCAAAACTCCGTCAAATCACCCAAA
TSA: Medicago truncatula Contig3248.Metrroot mRNA sequence.
JR371714.1:149-168
AAGCAGAGCCGCCACCGCATTCCATTTCAT149CAAATCAAACACCGTCAACGTCCAATCAAAACTCCGTCAAATCACCCAAA
Trifolium pratense DNA, clone:RCG08260.
DE217722.1:260-279
ATCCATGGCCGCCACCGCATTCCAGTTCAT260CAAATCAAACACCGTCAACGTCGAGTCAAAANNNNNNNNNNNNNNNNNNN
Trifolium pratense DNA, clone:RCG09849.
DE219014.1:260-279
ATCCATGGCCGCCACCGCATTCCAGTTCAT260CAAATCAAACACCGTCAACGTCGAGTCAAAA
Trifolium pratense DNA, clone:RCG14154.
DE222646.1:260-279
ATCCATGGCCGCCACCGCATTCCAGTTCAT260CAAATCAAACACCGTCAACGTCGAGTCAAAA
Trifolium pratense RNA for putative glucosyltransferase, complete cds, clone: C738.
AB236857.1:291-310
ATCCATGGCTGCCACCGCATTCCAGTTCAT291CAAATCAAACACCGTCAACGTCGAGTCAAAACTCCGTCAAATCTCACTAA
Trifolium subterraneum genome assembly, chromosome: 6.
OX637466.1:55327836-55327855
ATCCCGTGCCGCCACCGGATTCCAATTCAT55327836CAAATCAAACACCGTCAACGTCGAGTCAATACTCCGTCAAATCTCCCAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTTGACGGTGTTTGATTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTTGACGGTGTTTGATTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.339 | 0.330 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTGACGGTGTTTGATTTG&k=0&no_gap=0&offset=0&limit=50
0.549 | 0.210 | search_minus_done; http://172.18.8.135:50400/match?q=CAAATCAAACACCGTCAACG&k=0&no_gap=0&offset=0&limit=49
0.556 | 0.006 | cgi_end;

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