GGGenome | Results

Help | Japanese

2025-04-09 14:27:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Lotus japonicus genomic DNA, chromosome 2, clone: LjB02I05, BM1153.
AP007849.2:61899-61918

GATGGTGGTGTGATTATCTAGTCAAAGGGT61899CGTTTGGAGAAGGCAGAATCACTTTAATCGATCAAGTTCAGCGCGGAACC

Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:81665987-81666006

GATGGTGGTGTGATTATCTAGTCAAAGGGT81665987CGTTTGGAGAAGGCAGAATCACTTTAATCGATCAAGTTCAGCGCGGAACC

LJGAE94TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO008404.1:227-246

GGTTCCGCGCTGAACTTGATCGATTAAAGT227GATTCTGCCTTCTCCAAACGACCCTTTGACTAGATAATCACACCACCATC

Lotus japonicus clone JCVI-FLLj-16K1 unknown mRNA.
BT137229.1:227-246

GGTTCCGCGCTGAACTTGATCGATTAAAGT227GATTCTGCCTTCTCCAAACGACCCTTTGACTAGATAATCACACCACCATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTTGGAGAAGGCAGAATC&k=0&no_gap=0&offset=0&limit=50
0.215 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=GATTCTGCCTTCTCCAAACG&k=0&no_gap=0&offset=0&limit=48
0.217 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).