GGGenome | Results

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2025-04-09 16:41:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Tachinus rufipes genome assembly, chromosome: 7.
OZ010747.1:22450802-22450821

TGTAACTACTCAAGTTGCACAAATTATGTT22450802CGTTTGTCAAGTTCATGTTGAACTTTGAACAATTTTGATCGCTGTGTCAG

Cylloceria caligata genome assembly, chromosome: 2.
OZ012704.1:76390093-76390112

CTTTACCCTGTACATGTTTGTCGGAGTGAA76390093CGTTTGTCAAGTTCATGTTGGGAGCGGCCTCGTACTAATTGATGGAAAGA

TSA: Pyrus x bretschneideri Unigene78268_XinShao mRNA sequence.
JR663209.1:288-307

TATAACATGTCAACCTATTCTATAAAGCAA288CAACATGAACTTGACAAACGACGACTCATAAATCAATCATTAAACGTAGC

TSA: Pyrus x bretschneideri Unigene78270_XinShao mRNA sequence.
JR663211.1:250-269

TATAACATGTCAACCTATTCTATAAAGCAA250CAACATGAACTTGACAAACGACGACTCATAAATCAATCATTAAACGTAGC

Phaedon cochleariae genome assembly, chromosome: 2.
OU896708.1:50444201-50444220

ATTATTTTTTGAGAATAACTTGCCCAAATC50444201CAACATGAACTTGACAAACGAATAGCAAACCATAAAAAGTTCAATCACGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTTGTCAAGTTCATGTTG&k=0&no_gap=0&offset=0&limit=50
0.171 | 0.065 | search_minus_done; http://172.18.8.135:50400/match?q=CAACATGAACTTGACAAACG&k=0&no_gap=0&offset=0&limit=48
0.173 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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