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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:39:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chrysanthemum makinoi genome assembly, chromosome: 1.
OU343217.1:317161643-317161662
AGCTTTCATACGTTTTCGTTTGTTTTCATA317161643CGTTTTCGTCCATTTTCGTTAGTTTTCAACCATTTTCGTCCATTTTTTAT
Chrysanthemum makinoi genome assembly, chromosome: 4.
OU343220.1:84003102-84003121
GTCTTTTTTTACGTTTTCGGTAGTTTTTTA84003102CGTTTTCGTCCATTTTCGTTTTCGTCCGATTTTTACGTTTTGTCTCTTTT
Chrysanthemum makinoi genome assembly, chromosome: 4.
OU343220.1:123833891-123833910
TGTTTTCTTACGTTTTTGTCCGTTTTCATA123833891CGTTTTCGTCCATTTTCGTTCGTTTTCATACGTTTTCGTCCAGTTTCATC
Chrysanthemum makinoi genome assembly, chromosome: 5.
OU343221.1:4440866-4440885
GTTTTCTTACGTTTTCGTTCATTATTCATA4440866CGTTTTCGTCCATTTTCGTTCGTTTTCATACTTGTTTTTACGCTTTCATA
Chrysanthemum makinoi genome assembly, chromosome: 5.
OU343221.1:120076741-120076760
GTTTTCTTACGTTTTCTTTCATTATTCATA120076741CGTTTTCGTCCATTTTCGTTCGTTTTCATACTCTTTTTAACGCTTTCATA
Chrysanthemum makinoi genome assembly, chromosome: 5.
OU343221.1:244860615-244860634
CGTTTTCATACGTTTTTGTCTGTTTTCTTA244860615CGTTTTCGTCCATTTTCGTTCGTTTTCATACGTTTTCGTCCGTTTTCATC
Chrysanthemum makinoi genome assembly, chromosome: 6.
OU343222.1:3388699-3388718
CTTTTTCTTTCGTTTTTTTCATTATTCATA3388699CGTTTTCGTCCATTTTCGTTGTTTTTTCATACGTTTTTGTCTGTTTTCAT
Chrysanthemum makinoi genome assembly, chromosome: 6.
OU343222.1:190138068-190138087
GTTTTCTTACGTTTTCGTCCATTATTCATA190138068CGTTTTCGTCCATTTTCGTTCGTTTTCATACGTTTTCGTCCGTTTTCATA
Chrysanthemum makinoi genome assembly, chromosome: 6.
OU343222.1:284847019-284847038
GTTTTCTTACGTTTTCGTTCATTATTCATA284847019CGTTTTCGTCCATTTTCGTTCGTTTTCATACATTTTCATTTGTTTTCATA
Chrysanthemum makinoi genome assembly, chromosome: 6.
OU343222.1:301603625-301603644
TGTTTTCTTACGTTTTCGTTTGTTTTCATA301603625CGTTTTCGTCCATTTTCGTTCGTTTTCATACGATTTCGTCCGTTTTCTTT
Chrysanthemum makinoi genome assembly, chromosome: 8.
OU343224.1:29282555-29282574
GTTTTTTTACGTCTCTGTCCATTATTCATA29282555CGTTTTCGTCCATTTTCGTTTGTTTTCATCCGTTTTCATATGGGTTATTA
Chrysanthemum makinoi genome assembly, chromosome: 8.
OU343224.1:193982725-193982744
CGTTTTCTTATGTTTGCATCTGTTTTCTAA193982725CGTTTTCGTCCATTTTCGTTTGTTTTCTTACGTTTCTGACTATCGCAAGT
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:67993731-67993750
CGTTTTCATACGTTTTCGCCCGTTATCTTA67993731CGTTTTCGTCCATTTTCGTTTGTTTTCATACGTTTTCGTCCGTTTTCATA
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:68021903-68021922
CTCGCTTTCACATAATGCTCGTTATTCTTA68021903CGTTTTCGTCCATTTTCGTTTGTTTTCATAATTTCGTCCGCTTTCATACT
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:93834274-93834293
GTTTTCTTACGTTTTCGTTCATTATTCATA93834274CGTTTTCGTCCATTTTCGTTTGTTTTCATACGTTTTCGTCCGTTTTCATA
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:101248983-101249002
TCGTTTTCGTTCGTTTTCGCCCGTTTCATA101248983CGTTTTCGTCCATTTTCGTTCATTTACATATGTTTTCGTCCGTTTTCGTT
Siphonodentalium dalli isolate Sc116.8C chromosome V.
CP136065.1:211808163-211808182
ACTCGGTCAATGGGGAAAGTTACACGATGA211808163CGTTTTCGTCCATTTTCGTTGAAATCGACACGGTGACACCTTTGAATGAA
Autographa pulchrina genome assembly, chromosome: 8.
FR997770.1:6857229-6857248
TTGATGAATAATTTGTTCTTCAGAAACAAA6857229CGTTTTCGTCCATTTTCGTTGACGTAAAATCCAATAATAAATTGTATTGA
Sepia lycidas genome assembly, chromosome: 10.
OZ010580.1:48853962-48853981
ATTTCAGAATTTTTCACTACCAAGGATGTT48853962CGTTTTCGTCCATTTTCGTTCTCTGTCTATCTCAGTCGGTTCATACCTAT
TSA: Litopenaeus vannamei mRNA sequence.
JP430603.1:679-698
GGAACTTTCACATACACTATCTAATAACGA679AACGAAAATGGACGAAAACGAAAGAACTCGACGTCTAGAACAGTGAATGA
Chrysanthemum makinoi genome assembly, segment: 0.
OU343216.1:6769719-6769738
AAAAACGACTAAAACGTGAAAAAACATGAA6769719AACGAAAATGGACGAAAACGTAAAAACCGCATAAAAACGTGAAAAACGGA
Chrysanthemum makinoi genome assembly, chromosome: 3.
OU343219.1:49656446-49656465
TCTGAAAACGGATGAAAACGTATCAAAACA49656446AACGAAAATGGACGAAAACGTATGAAAAATGGATGAAAACGTAAGAAAAC
Chrysanthemum makinoi genome assembly, chromosome: 3.
OU343219.1:176736022-176736041
GTCCTATTTTTTTTTAAATCATAAAAGACG176736022AACGAAAATGGACGAAAACGTAAAAATACAGACGAAACGTAAAATACGGA
Chrysanthemum makinoi genome assembly, chromosome: 5.
OU343221.1:239190986-239191005
GTCAGAAACGTATGAAAACGAACGAAAACG239190986AACGAAAATGGACGAAAACGTAAGAAAACGGACGAATTCGTATGAAAAAT
Chrysanthemum makinoi genome assembly, chromosome: 5.
OU343221.1:270697758-270697777
CACAAAAGGATGAAAACGCAAAAAAACTAA270697758AACGAAAATGGACGAAAACGAAATAAACATTTAAAACGGAAAAAAAAATA
Chrysanthemum makinoi genome assembly, chromosome: 6.
OU343222.1:151381508-151381527
TAAGAAAACGGACGAAAATGTAAGAAAACG151381508AACGAAAATGGACGAAAACGTAATAAAACAGACGAAAACGGACGAAAACG
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:120691802-120691821
GTAAGAAACCGGACGAAAACGTATAAAACG120691802AACGAAAATGGACGAAAACGTATGAAAACAAACGAAAATGTATGAAAGCG
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:253591790-253591809
TATGAAAGCATAAAAACAAGTATGAAAATG253591790AACGAAAATGGACGAAAACGTATGAATAATGAACGAAAACATAAGAAAAC
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:304212141-304212160
TCTGACAACGGACGAAAACGTATAAAAACG304212141AACGAAAATGGACGAAAACGGACAAAAATGTCTAAAAACAGACGAAAGCG
Euspilapteryx auroguttella genome assembly, chromosome: 12.
OX637653.1:8894604-8894623
CGTGGCGGCGACGTATTCATGTTCGCTACT8894604AACGAAAATGGACGAAAACGTTTTTTGAATTGATGCAACAAACTTGCTTG
Cerastis leucographa genome assembly, chromosome: 11.
OY720356.1:10187036-10187055
CTGCCTGACCTTTTGACGAATACGTCATGA10187036AACGAAAATGGACGAAAACGTTCATGTTGTTGAAATAAATTGTTTCTTAG
Thysanoteuthis rhombus genome assembly, chromosome: 5.
OY735202.1:67873139-67873158
TTTGGGGCACTGTACAGTTTTTCGAAATTA67873139AACGAAAATGGACGAAAACGAATTTTCATTGATTTTTTAAAAATATTCCT
Hololepta plana genome assembly, chromosome: 5.
OY968836.1:8256587-8256606
ATTAAATCCGATGAATTCGATTTGTAAATG8256587AACGAAAATGGACGAAAACGAAACTGTAAAGATTAAATTACGACGTTTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTTTTCGTCCATTTTCGTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTTTTCGTCCATTTTCGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.158 | 0.150 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTTTCGTCCATTTTCGTT&k=0&no_gap=0&offset=0&limit=50
0.280 | 0.121 | search_minus_done; http://172.18.8.135:50400/match?q=AACGAAAATGGACGAAAACG&k=0&no_gap=0&offset=0&limit=31
0.289 | 0.009 | cgi_end;

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