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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 16:20:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Pisum sativum Ps_contig_mira-ass_82691 mRNA sequence.
JI964254.1:94-115
CACTCTCTCATTATTTCTCATCAAAATTTT94CGTTTTGGTTACGATCGAGCTATATCTATCTTAATTCTCATATAAATATTCA
K6 Whero seedling lambda ZapII cDNA library Pisum sativum cDNA clone K6, mRNA sequence.
AA430942.1:719-740
TGAATATTTATATGAGAATTAAGATAGATA719TAGCTCGATCGTAACCAAAACGAAATTTTTGATGAGAAATAATGAGAGAGTG
TSA: Lens culinaris contig03482.Lecu mRNA sequence.
JI849753.1:546-567
ATGGAATATTTATATGAGAATTAAGATAGA546TAGCTCGATCGTAACCAAAACGAAATTTTTGATGAGAAATAATGAGAGAGTA
TSA: Pisum sativum Ps_contig_mira-ass_982 mRNA sequence.
JI897831.1:949-970
TGAATATTTATATGAGAATTAAGATAGATA949TAGCTCGATCGTAACCAAAACGAAAATTTTGATGAGAAATAATGAGAGAGTG
TSA: Pisum sativum Ps_contig_mira-ass_16640 mRNA sequence.
JI913088.1:309-330
TGAATATTTATATGAGAATTAAGATAGATA309TAGCTCGATCGTAACCAAAACGAAATTTTTGATGAGAAATAATGAGAGAGTG
TSA: Pisum sativum contig01804.PisaPYK9 mRNA sequence.
JR952516.1:887-908
TGAATATTTATATGAGAATTAAGATAGATA887TAGCTCGATCGTAACCAAAACGAAATTTTTGATGAGAAATAATGAGAGAGTG
Lathyrus sativus genome assembly, chromosome: 4.
OZ012738.1:642361642-642361663
GGAATATTTATATGAGAATTAAGATAGATA642361642TAGCTCGATCGTAACCAAAACGAAATTTTTGATGAGAAATAATGAGAGAGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTTTTGGTTACGATCGAGCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTTTTGGTTACGATCGAGCTA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.252 | 0.244 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTTTGGTTACGATCGAGCTA&k=0&no_gap=0&offset=0&limit=50
0.351 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=TAGCTCGATCGTAACCAAAACG&k=0&no_gap=0&offset=0&limit=49
0.355 | 0.004 | cgi_end;

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