GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 18:47:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EoEST0331 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-262 5' similar to Syntaxin-like protein, mRNA sequence.
EL595301.1:106-126
TTCGAAAGTAAATCTCGGTCCCGTCGCCCC106CTAAAATTCCCTCATCGTCTCCTTCCGTCAAGGCCGCCCCTCCTCGATTTG
pOP-EO03035 EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO03035 similar to Syntaxin, mRNA sequence.
ES324086.1:24-44
GTTAATCTCGGTCCCGTCGCCCC24CTAAAATTCCCTCATCGTCTCCTTCCGTCAAGGCCGCCCCTCCTCGATTCG
pOP-EO03035_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO03035 5', mRNA sequence.
EY408538.1:24-44
GTTAATCTCGGTCCCGTCGCCCC24CTAAAATTCCCTCATCGTCTCCTTCCGTCAAGGCCGCCCCTCCTCGATTCG
Elaeis guineensis EST, clone (6lib)_isotig28388.
LM621843.1:106-126
TTCGAAAGTAAATCTCGGTCCCGTCGCCCC106CTAAAATTCCCTCATCGTCTCCTTCCGTCAAGGCCGCCCCTCCTCGATTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTAAAATTCCCTCATCGTCTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAAAATTCCCTCATCGTCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.345 | 0.337 | search_plus_done; http://172.18.8.135:50400/match?q=CTAAAATTCCCTCATCGTCTC&k=0&no_gap=0&offset=0&limit=50
0.374 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=GAGACGATGAGGGAATTTTAG&k=0&no_gap=0&offset=0&limit=46
0.374 | 0.000 | cgi_end;

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