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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-02 23:13:22, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:40055558-40055577
TGATGAACATTTGATTCATTTTTTTTATTC40055558CTAAGCACTTGATCGTCCATTTTGGGATATTCTTTGAGTTGATGAAAACA
Brassica napus genome assembly, chromosome: C02.
HG994366.1:27135056-27135075
TGATGAACATTTGATTCATTTTTTTTATTC27135056CTAAGCACTTGATCGTCCATTTTGGGATATTCTTTGAGTTGATGAAAACA
Brassica nigra genome assembly, chromosome: 3.
OZ173173.1:2416129-2416148
TTGATGGAACATATGACTCGTTTTTTATTC2416129CTAAGCACTTGATCGTCCATTTTGGAATATGCTGAGTTGAAAACTCACAC
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:14155175-14155194
TTCATCAACTCAAATAATATCCCTCCCAAA14155175ATGGACGATCAAGTGCTTAGGAATAAAAAAAATAATCAAATGTTTCATCA
Brassica napus cultivar Xiang5A chromosome 2.
CP151897.1:12906574-12906593
TTCATCAACTCAAATAATATCCCTCCCAAA12906574ATGGACGATCAAGTGCTTAGGAATAAAAAAAATAATCAAATGTTTCATCA
Brassica napus cultivar Xiang5A chromosome 12.
CP151907.1:26356820-26356839
TGTTTTCATCAACTCAAAGAATATCCCAAA26356820ATGGACGATCAAGTGCTTAGGAATAAAAAAAATGAATCAAATGTTCATCA
Brassica napus genome assembly, chromosome: A02.
HG994356.1:13969199-13969218
TTCATCAACTCAAATAATATCCCTCCCAAA13969199ATGGACGATCAAGTGCTTAGGAATAAAAAAAATAATCAAATGTTTCATCA
Brassica rapa genome, scaffold: A02.
LR031573.1:13679451-13679470
TTCATCAACTCAAATAATATCCCTCCCAAA13679451ATGGACGATCAAGTGCTTAGGAATAAAAAAAATAATCAAATGTTTCATCA
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:28038872-28038891
TGTTTTCATCAACTCAAAGAATATCCCAAA28038872ATGGACGATCAAGTGCTTAGGAATAAAAAAAATGAATCAAATGTTCATCA
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:13753120-13753139
TTCATCAACTCAAATAATATCCCTCCCAAA13753120ATGGACGATCAAGTGCTTAGGAATAAAAAAAATAATCAAATGTTTCATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTAAGCACTTGATCGTCCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAAGCACTTGATCGTCCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.267 | 0.258 | search_plus_done; http://172.18.8.135:50800/match?q=CTAAGCACTTGATCGTCCAT&k=0&no_gap=0&offset=0&limit=50
0.386 | 0.119 | search_minus_done; http://172.18.8.135:50800/match?q=ATGGACGATCAAGTGCTTAG&k=0&no_gap=0&offset=0&limit=47
0.391 | 0.005 | cgi_end;

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