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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-05 21:35:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 4, clone: LjB356P07, BM1727.
AP010377.1:11220-11239
TGATCATTAATCCATGGCCAAAAATTCCTC11220CTAATTCCAAGGGGAGCAACTAAAGTTATCCACAATATATATATATATAT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:64715576-64715595
TGATCATTAATCCATGGCCAAAAATTCCTC64715576CTAATTCCAAGGGGAGCAACTAATGAGAGGTTCAAATTCAAATATCCCAT
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:48718860-48718879
TGATCATTTAACCATGGCAAAAAATTCCTC48718860CTAATTCCAAGGGGAGCAACTAATGTGATGACCCGGGATTAAATGTTATT
Lumbricus rubellus genome assembly, chromosome: 4.
OX243814.1:13451907-13451926
TAGAAATAGAATGTATTGGAGTATACAAAC13451907CTAATTCCAAGGGGAGCAACTGATAAAGTAATTATGCTGACTATTGTAAA
Lotus japonicus genomic DNA, chromosome 3, clone: LjT02H21, TM1296.
AP010591.1:59455-59474
ATGGAATATTTGAATTTGAACCTCTCATTA59455GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT10G09, TM0173a.
AP006095.1:10726-10745
ATATATATATATATATTGTGGATAACTTTA10726GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus genomic DNA, chromosome 6, clone: LjT28D11, TM1650b.
AP009849.1:7964-7983
AATAACATTTAATCCCGGGTCATCACATTA7964GTTGCTCCCCTTGGAATTAGGAGGAATTTTTTGCCATGGTTAAATGATCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:547169-547188
ATGGGATATTTGAATTTGAACCTCTCATTA547169GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:65866163-65866182
ATGGAATATTTGAATTTGAACCTCTCATTA65866163GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:53477992-53478011
ATATATATATATATATTGTGGATAACTTTA53477992GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTAATTCCAAGGGGAGCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAATTCCAAGGGGAGCAAC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.179 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=CTAATTCCAAGGGGAGCAAC&k=0&no_gap=0&offset=0&limit=50
0.288 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGCTCCCCTTGGAATTAG&k=0&no_gap=0&offset=0&limit=46
0.292 | 0.004 | cgi_end;

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