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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 03:59:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:247353657-247353677
ACAATATTGAGAAGTGGTGTTCTTAGGGTC247353657CTACTCCTTAATGCCAGTGGCTTTGATAGGGAAAAGTTCAAGAGTTTCAAG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 12.
CP124708.1:101629002-101629022
ACAATATTGAGAAGTGGTGTTCTTGGGGTC101629002CTACTCCTTAATGCCAGTGGCTTTGATAGGGAAAAGTTCAAGGGTTTCAAG
Solanum tuberosum cultivar P8 chromosome 11.
CP046684.1:44888712-44888732
CTTGAAACCCTAGAACTTTTCCCTATCAAA44888712GCCACTGGCATTAAGGAGTAGGGCTAGCTAGCCCCAACAATATAATATTCT
Solanum tuberosum cultivar MSH/14-112 chromosome 11.
CP046691.1:44888863-44888883
CTTGAAACCCTAGAACTTTTCCCTATCAAA44888863GCCACTGGCATTAAGGAGTAGGGCTAGCTAGCCCCAACAATATAATATTCT
Solanum pinnatisectum cultivar CGN17745 chromosome 11.
CP047563.1:44861729-44861749
CTTGAAACCCTAGAACTTTTCCCTATCAAA44861729GCCACTGGCATTAAGGAGTAGGGCTAGCTAGCCCCAACAATATAATATTCT
Solanum tuberosum cultivar Solyntus chromosome 11.
CP055244.1:56458722-56458742
CTTGAAACCCTAGAACTTTTCCCTATCAAA56458722GCCACTGGCATTAAGGAGTAGGGCTAGCTAGCCCCAACAATATAATATTCT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 11.
CP124721.1:30205160-30205180
CTTGAAACTCTTGAACTTTTCCCTATCAAA30205160GCCACTGGCATTAAGGAGTAGGACCCTAAGAACACCACTTCTCAATATTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTACTCCTTAATGCCAGTGGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTACTCCTTAATGCCAGTGGC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.373 | 0.364 | search_plus_done; http://172.18.8.135:50400/match?q=CTACTCCTTAATGCCAGTGGC&k=0&no_gap=0&offset=0&limit=50
0.487 | 0.115 | search_minus_done; http://172.18.8.135:50400/match?q=GCCACTGGCATTAAGGAGTAG&k=0&no_gap=0&offset=0&limit=48
0.491 | 0.003 | cgi_end;

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