GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 12:57:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Hyperoplus immaculatus genome assembly, chromosome: 3.
OX442351.1:27416073-27416092
AGTTTTATAAGTTGGCTCCACTCATTCTGG27416073CTACTGTCCTCAGCCAAGTCATTAAAAAAATTCCCCTATAATTTTTAAAT
Acomys russatus genome assembly, chromosome: 14.
LR877225.1:36767971-36767990
ATAAATCAATGTGCGAGTAGCCTGGAGACA36767971GACTTGGCTGAGGACAGTAGTCTTTAAGAGGAACCAGTGGCGCCCTGCTT
Acomys kempi genome assembly, chromosome: 8.
OU015362.1:99877429-99877448
GTAAATCAGTGCGCGAGTAGCCTGGAGACA99877429GACTTGGCTGAGGACAGTAGTCTTTAAGAGGAACCAGTGGCGCCCTGCTT
Acomys dimidiatus genome assembly, chromosome: 8.
OU015381.1:99551436-99551455
GTAAATCAGTGCACGAGTAGCCTGGAGACA99551436GACTTGGCTGAGGACAGTAGTCTTTAAGAGGAACCAGTGACGCCCTGCTT
Acomys percivali genome assembly, chromosome: 8.
OU015749.1:100734125-100734144
ATAAATCAATGTGCGAGTAGCCTGGAGACA100734125GACTTGGCTGAGGACAGTAGTCTTTAAGAGGAACCAGTGGCGCCCTGCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTACTGTCCTCAGCCAAGTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTACTGTCCTCAGCCAAGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=CTACTGTCCTCAGCCAAGTC&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GACTTGGCTGAGGACAGTAG&k=0&no_gap=0&offset=0&limit=49
0.117 | 0.003 | cgi_end;

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