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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 16:16:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Rangifer tarandus platyrhyncus genome assembly, chromosome: 22.
OX596106.1:21391005-21391026
TTTGATATGTCGGGCTGGATGAATCACAAG21391005CTAGAATGAAGATTGCTGGCAGAAATATCAACAACCTCAAATGTGCAGATGA
Populus nigra genome assembly, chromosome: 6.
OX637677.1:2199291-2199312
TGACCATGTGTATACTGTAGATGAGTGGCT2199291CTAGAATGAAGATTGCTGGCAGATTTAAACCTTGTGCTCACATGGGCTGTTT
Viola odorata genome assembly, chromosome: 6.
OY829542.1:5838294-5838315
TTTCTATATGGAAATGATAGATGAGTGGTT5838294CTAGAATGAAGATTGCTGGCAGATTTAGAGCTTGTATTCATTTGGGCTGTTT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 22.
OX459958.2:40946777-40946798
TCATCTGCACATTTGAGGTTGTTGATATTT40946777CTGCCAGCAATCTTCATTCTAGCTTGTGATTCATCCAGCCCGACATATCAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTAGAATGAAGATTGCTGGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAGAATGAAGATTGCTGGCAG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.331 | 0.323 | search_plus_done; http://172.18.8.135:50400/match?q=CTAGAATGAAGATTGCTGGCAG&k=0&no_gap=0&offset=0&limit=50
0.442 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCCAGCAATCTTCATTCTAG&k=0&no_gap=0&offset=0&limit=47
0.443 | 0.001 | cgi_end;

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