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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 06:20:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Human DNA sequence from clone RP11-295G24 on chromosome 9.
AL445645.10:102596-102615
AGCAGGTTAGGAGACAGCAGGAACTGCCTC102596CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Homo sapiens DNA, chromosome 9, nearly complete genome.
AP023469.1:133415676-133415695
AGCAGGTTAGGAGACAGCAGGAACTGCCTC133415676CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Homo sapiens isolate CHM13 chromosome 9.
CP068269.2:145070561-145070580
AGCAGGTTAGGAGACAGCAGGAACTGCCTC145070561CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Homo sapiens isolate NA24385 chromosome 9.
CP139512.1:138193793-138193812
AGCAGGTTAGGAGACAGCAGGAACTGCCTC138193793CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Homo sapiens isolate NA24385 chromosome 9.
CP139535.1:125876589-125876608
AGCAGGTTAGGAGACAGCAGGAACTGCCTC125876589CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Meles meles genome assembly, chromosome: 4.
OV277444.1:44245060-44245079
GGCCAGAATAGGCAAACAGAAAGTGGTTGC44245060CTAGAGTTTGGGAGGGGGAGAGGGAACAATGAGAAGTGATTGCTAATGAG
Sequence 878 from patent US 10724096.
MV447978.1:144370-144389
AGCAGGTTAGGAGACAGCAGGAACTGCCTC144370CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Sequence 992 from patent US 10724096.
MV448092.1:133170-133189
AGCAGGTTAGGAGACAGCAGGAACTGCCTC133170CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Sequence 878 from patent US 11549145.
OS136778.1:144370-144389
AGCAGGTTAGGAGACAGCAGGAACTGCCTC144370CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Sequence 992 from patent US 11549145.
OS136892.1:133170-133189
AGCAGGTTAGGAGACAGCAGGAACTGCCTC133170CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Uncultured Sulfurimonas sp. clone TVG01-33 16S ribosomal RNA gene, partial sequence.
KF545011.1:628-647
AACCATAGAACTGCATTGGAAACTGGTTAC628CTAGAGTTTGGGAGGGGGAGATGGAATAAGTGGTGTAGGGGTAAAAATCG
Eukaryotic synthetic construct chromosome 9.
CP034508.1:135724134-135724153
AGCAGGTTAGGAGACAGCAGGAACTGCCTC135724134CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
Eukaryotic synthetic construct chromosome 9.
CP034533.1:135724134-135724153
AGCAGGTTAGGAGACAGCAGGAACTGCCTC135724134CTAGAGTTTGGGAGGGGGAGACAGGAGGGTTGGGGGACCAGAGACAAGAG
EST1233296 ESTSYN-F Musa acuminata AAA Group cDNA clone pESTSYNF-10A8 5', mRNA sequence.
ES433089.1:169-188
CCGCAGCCGCTGCTGCCAACCGGAGGAAAT169CTAGAGTTTGGGAGGGGGAGAGGGAAGGAGGGGACGGTGATCAGCCGGAA
TSA: Musa acuminata AAA Group Unigene16004_NK1 mRNA sequence.
JV439338.1:1315-1334
CCGCAGCCGCTGCTGCCAACCGGAGGAAAT1315CTAGAGTTTGGGAGGGGGAGAGGGAAGGAGGGGACGGTGATCAGCCGGAA
Musa troglodytarum cultivar karat chromosome 1.
CP097502.1:24869731-24869750
CCGCAGCCGCTGCTGCCAACCGGAGGAAAT24869731CTAGAGTTTGGGAGGGGGAGAGGGAAGGAGGGGACGGTAATCAGCCGGAA
Homo sapiens chromosome 9q34, clone 269A1, complete sequence.
AC004589.1:16606-16625
CTCTTGTCTCTGGTCCCCCAACCCTCCTGT16606CTCCCCCTCCCAAACTCTAGGAGGCAGTTCCTGCTGTCTCCTAACCTGCT
Caprimulgus europaeus genome assembly, chromosome: 17.
OU015541.1:11821228-11821247
CCACCAAAAAAAAGAAAAAAAACAAGATTG11821228CTCCCCCTCCCAAACTCTAGGTGAAGAACTAGGAACCAGCAAACGACAAT
TSA: Musa acuminata AAA Group Unigene14911_B1 mRNA sequence.
JV360483.1:111-130
TTCCGGCTGATCACCGTCCCCTCCTTCCCT111CTCCCCCTCCCAAACTCTAGATTTCCTCCGGTTGGCAGCAGCGGCTGGGG
Human DNA sequence *** SEQUENCING CANCELLED *** from clone RP11-168A7.
AL161726.8:2874-2893
CTCTTGTCTCTGGTCCCCCAACCCTCCTGT2874CTCCCCCTCCCAAACTCTAGGAGGCAGTTCCTGCTGTCTCCTAACCTGCT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A01.
HG996466.1:10303320-10303339
TTCCGGCTGATCACCGTCCCCTCCTTACCT10303320CTCCCCCTCCCAAACTCTAGATTTCCTCCGGTTGGCAGCAGCGGCTGCGG
Musa schizocarpa genome assembly, chromosome: S01.
LS990915.1:11143067-11143086
TTCCGGCTGATCACCGTCCCCTCCTTCCCT11143067CTCCCCCTCCCAAACTCTAGATTTCCTCCGGTTGGCAGCAGCGGCTGCGG
Onchidella celtica genome assembly, chromosome: 4.
OZ007570.1:73998568-73998587
ATGCGCCGGAAAGTTTAGCATAAAAATAAC73998568CTCCCCCTCCCAAACTCTAGGGGCGGTATGCGAATTTTCCCGTCTTATTC

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