GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:17:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Solanum lycopersicum cultivar Heinz 1706 chromosome 7 clone C07HBa0102J11, complete sequence.
AC210354.1:36398-36419
TGCCTACTGACATGCAAATCTCAAAACAAA36398CTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTT
Solanum lycopersicum Micro-Tom DNA, chromosome 7, draft genome sequence.
AP028941.1:67356546-67356567
AACAGTGTTAGTTTGCTTACATTACATCCT67356546GTGTTTGCCAAGGATTTCCTAGTTTGTTTTGAGATTTGCATGTCAGTAGGCA
Solanum lycopersicum cultivar I-3 chromosome 7.
CP023763.1:64920560-64920581
AACAGTGTTAGTTTGCTTACATTACATCCT64920560GTGTTTGCCAAGGATTTCCTAGTTTGTTTTGAGATTTGCATGTCAGTAGGCA
Solanum verrucosum cultivar 11H23 chromosome 7.
CP133618.1:46305136-46305157
AACAGTGTTAGTTCGCTTACATTACATCCT46305136GTGTTTGCCAAGGATTTCCTAGTTTATTTTGAGACTTGCATGTCAATAAGCA
Solanum pennellii chromosome ch07, complete genome.
HG975446.1:75951353-75951374
AACAGTGTTAGTTTGCTTGCATTACATCCT75951353GTGTTTGCCAAGGATTTCCTAGTTTGTTTTGAGATTTGCATGTCAGTAGGCA
Solanum lycopersicum chromosome ch07, complete genome.
HG975519.1:62144182-62144203
AACAGTGTTAGTTTGCTTACATTACATCCT62144182GTGTTTGCCAAGGATTTCCTAGTTTGTTTTGAGATTTGCATGTCAGTAGGCA
Solanum lycopersicum genome assembly, chromosome: 7.
OU640350.1:65793861-65793882
AACAGTGTTAGTTTGCTTACATTACATCCT65793861GTGTTTGCCAAGGATTTCCTAGTTTGTTTTGAGATTTGCATGTCAGTAGGCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTAGGAAATCCTTGGCAAACAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAGGAAATCCTTGGCAAACAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=CTAGGAAATCCTTGGCAAACAC&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=GTGTTTGCCAAGGATTTCCTAG&k=0&no_gap=0&offset=0&limit=49
0.133 | 0.004 | cgi_end;

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