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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 03:19:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_10757.
FX700695.1:27-46
AACATAAACGTTGTCTCCCTAAAACC27CTAGGCTGCCCTTTCCGATTCAAATCTTGTCTCCAAAACCCTAATCCTCT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB022C05, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC189265.2:7218-7237
CGTGAACATAAACGTTGTCTCCCTAAAACC7218CTAGGCTGCCCTTTCCGATTCAAATCTTGTCTCCAAAACCCTAATCCTCT
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 882 unordered pieces.
FJ789639.1:2731290-2731309
CGTGAACATAAACGTTGTCTCCCTAAAACC2731290CTAGGCTGCCCTTTCCGATTCAAATCTTGTCTCCAAAACCCTAATCCTCT
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 66 unordered pieces.
FJ789649.1:579019-579038
CGTGAACATAAACGTTGTCTCCCTAAAACC579019CTAGGCTGCCCTTTCCGATTCAAATCTTGTCTCCAAAACCCTAATCCNNN
Brassica napus genome assembly, chromosome: A07.
HG994361.1:697509-697528
CGTGAACATAAACGTTGTCTCCCTAAAACC697509CTAGGCTGCCCTTTCCGATTCAAATCTTGTCTCCAAAACCCTAATCCTCT
Brassica rapa genome, scaffold: A07.
LR031574.1:759429-759448
CGTGAACATAAACGTTGTCTCCCTAAAACC759429CTAGGCTGCCCTTTCCGATTCAAATCTTGTCTCCAAAACCCTAATCCTCT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:761516-761535
CGTGAACATAAACGTTGTCTCCCTAAAACC761516CTAGGCTGCCCTTTCCGATTCAAATCTTGTCTCCAAAACCCTAATCCTCT
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:35672392-35672411
AGAGGATTAGGGTTTTGGAGACAAGATTTG35672392AATCGGAAAGGGCAGCCTAGGGTTTTAGGGAGACAACGTTTATGTTCACG

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