GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:54:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Rattus norvegicus clone CH230-362C11, WORKING DRAFT SEQUENCE, 3 ordered pieces.
AC119635.7:85472-85490
AGATTCTTAATAGTTGTAAAATGGAGCCTT85472CTAGGGTTGAGGGCAAACTCCATGCACCCAACTAATGCCTGAGTTTTCA
Chorisops tibialis genome assembly, chromosome: 1.
OY770262.1:281358551-281358569
GACCGTTTATATTTCACTGTACGAGTAGGA281358551CTAGGGTTGAGGGCAAACTCGTGCGCACGTTTAGCTTGACGAGTATTTC
Humulus lupulus genome assembly, chromosome: 2.
OY720648.1:118408967-118408985
TTTATACAAATTCTTAAAAACTAAAAGACT118408967AGTTTGCCCTCAACCCTAGCTTTCCCATTATTAGGTTCAAGTCCTTTTA
Halichondria panicea genome assembly, chromosome: 12.
OY776071.1:4811306-4811324
TGTTAATTCTGCCTCTGTTTCGTGTCCGTG4811306AGTTTGCCCTCAACCCTAGCACATGCAGTTAAAACCATTGAAACTTTAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTAGGGTTGAGGGCAAACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAGGGTTGAGGGCAAACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CTAGGGTTGAGGGCAAACT&k=0&no_gap=0&offset=0&limit=50
0.122 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=AGTTTGCCCTCAACCCTAG&k=0&no_gap=0&offset=0&limit=48
0.123 | 0.002 | cgi_end;

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