GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:25:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2689157-2689176
CGGAAATATCGGTAGTCCAAAAAAATATCA2689157CTAGTCCAAAAACGCGGAAATTTCGATGGAAATATCGGGATATTATGGAT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2688890-2688909
CGGAAATATCGGTAGTCCAAAAAAATATCA2688890CTAGTCCAAAAACGCGGAAATTTCGATGGAAATATCGGGATATTATGGAT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2861854-2861873
CGGAAATATCGGTAGTCCAAAAAAATATCA2861854CTAGTCCAAAAACGCGGAAATTTCGATGGAAATATCGGGATATTATGGAT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2901811-2901830
CGGAAATATCGGTAGTCCAAAAAAATATCA2901811CTAGTCCAAAAACGCGGAAATTTCGATGGAAATATCGGGATATTATGGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTAGTCCAAAAACGCGGAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAGTCCAAAAACGCGGAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.097 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CTAGTCCAAAAACGCGGAAA&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCCGCGTTTTTGGACTAG&k=0&no_gap=0&offset=0&limit=46
0.115 | 0.000 | cgi_end;

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