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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 18:11:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pipistrellus pipistrellus genome assembly, chromosome: 7.
LR862363.1:71783108-71783127
ACACTTGTTCTCCCCTCCTCTTCAACTCCC71783108CTATATTCACTGGAATAGTGGGGTTCAGATTGGGGAGCAGAAGAACTGTA
Avena insularis genome assembly, chromosome: 5D.
OU342349.1:401921207-401921226
AGTGGGGACTAAAATAATATATATCGTAAA401921207CTATATTCACTGGAATAGTGAAGAAAACGAATTGATAGTCGGTTATCAAA
Populus nigra genome assembly, chromosome: 15.
OX637686.1:2892571-2892590
ACCAGAGAGAGAGAGAGAGAGAGAGAGAAA2892571CACTATTCCAGTGAATATAGTTTTTTGGGGTACAATAAAATTCCCTCCTC
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737490.1:523319334-523319353
ATGCAATATTATTTTGCATGACCTTGAATC523319334CACTATTCCAGTGAATATAGTTTTCAGCTTGAATCCTCTCTATCCCAATA
Thioploca ingrica DNA, complete genome.
AP014633.1:1015009-1015028
CTTTGCTTTTAGCACTGCCAGTAGTAATGC1015009CACTATTCCAGTGAATATAGAAAATACCGAAAAACATTTAGGTGTAGATA
Esperia sulphurella genome assembly, chromosome: 6.
OX352263.1:11172533-11172552
AAATAACTGAATAATGAGGTTATCATCATA11172533CACTATTCCAGTGAATATAGAATATAACGTACATATACGTCGGTGGACCT
Chalcosyrphus nemorum genome assembly, chromosome: 1.
OX454332.1:14656652-14656671
ATTCCTTGCGTGTGTTATGGGTGCAGTATG14656652CACTATTCCAGTGAATATAGTGATAGAGAATATCGCTGTGGTCTGGGGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTATATTCACTGGAATAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTATATTCACTGGAATAGTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.341 | 0.332 | search_plus_done; http://172.18.8.135:50400/match?q=CTATATTCACTGGAATAGTG&k=0&no_gap=0&offset=0&limit=50
0.449 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=CACTATTCCAGTGAATATAG&k=0&no_gap=0&offset=0&limit=48
0.453 | 0.003 | cgi_end;

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