GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-15 21:40:01, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JP 2003235570-A/26: Polypeptide having interaction with hibernation-specific protein and its utilization.
DJ389574.1:623-648
CCAGGACCTTGCACATGCTAAGCAAGTACT623CTATGACCGATTTAGTGAGGGTTAATAGTCATTATGCTGAGTGATATCTTTTTTTT
EST00005 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoD5-5 5', mRNA sequence.
CB252007.1:170-195
CCCACGTTAGGGCGTTCGCGCCCCAAGGGC170CTATGACCGATTTAGTGAGGGTTAAT
EST0102 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991365.1:522-547
CGGACTCTTCTGCTATGAGCTCAACTGCTG522CTATGACCGATTTAGTGAGGGTTAATAATCGAATTCCCGCGG
EST0103 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991366.1:517-542
ATGAAGGGGCGGCCGTTCAAACGGTCGTGG517CTATGACCGATTTAGTGAGGGTTAATAATCGAATTCCCGCGGCCGC
EST0107 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991367.1:518-543
GAACCCACTATAACTCAAGGTCCAAGCTTA518CTATGACCGATTTAGTGAGGGTTAATAATCGAATTCCCGCGGCCG
54-3 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605608.1:258-283
CAACAAACATTGACCACTATGAAATTTCAT258CTATGACCGATTTAGTGAGGGTTAAT
54-17 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605622.1:258-283
CAACAAACATTGACCACTATGAAATTTCAT258CTATGACCGATTTAGTGAGGGTTAAT
54-29 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605634.1:147-172
AAAAAATAAAAAGCTCTGCTTACGTACACC147CTATGACCGATTTAGTGAGGGTTAATAA
54-48 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605653.1:136-161
TGTTTCTAGTTCACTTCCTCCCCTTCAATT136CTATGACCGATTTAGTGAGGGTTAAT
DD-L23-2a Sugar Beet differential display cDNA Beta vulgaris cDNA similar to putative retroelement pol polyprotein, mRNA sequence.
CX779668.1:303-328
GCCTCCTCTACGTTGTCCTTTTTTGAATCC303CTATGACCGATTTAGTGAGGGTTAAT
DD-L25-1a Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779670.1:283-308
GTATGCCGTGGACCTGGGCCAACGCTTTGG283CTATGACCGATTTAGTGAGGGTTAATAA
DD-L29-2a Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779673.1:407-432
TAAAATGGACTCTGAGATCTGAACCCCTTG407CTATGACCGATTTAGTGAGGGTTAAT
DD-L18-2 Sugar Beet differential display cDNA Beta vulgaris cDNA similar to Pectinacetylesterase, mRNA sequence.
CX779674.1:597-622
GACTATTTGCAAGGCTGTGGGTGACTGGTT597CTATGACCGATTTAGTGAGGGTTAAT
DD-L19-1 Sugar Beet differential display cDNA Beta vulgaris cDNA similar to non-LTR retroelement reverse transcriptase-like protein, mRNA sequence.
CX779676.1:302-327
AGAGGCCACATATTGTGTTTTTGATGGAAA302CTATGACCGATTTAGTGAGGGTTAAT
DD-L19-5 Sugar Beet differential display cDNA Beta vulgaris cDNA similar to putative retroelement pol polyprotein, mRNA sequence.
CX779677.1:294-319
TACACACTCGCCACTTGCCATTTTTCTTGC294CTATGACCGATTTAGTGAGGGTTAAT
DD-L21-3 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779679.1:297-322
CTTCCATAAGAATCTCTACTATAATTTCTT297CTATGACCGATTTAGTGAGGGTTAAT
DD-P25-5.1 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779684.1:392-417
TGTACAGAATATATTTCTCAGAGGACAACC392CTATGACCGATTTAGTGAGGGTTAATA
DD-P25-4.1 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779685.1:504-529
CGATCGTGTGGGGCCAAAAAAAGAAATTAA504CTATGACCGATTTAGTGAGGGTTAATA
DD-P25-3.1 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779686.1:526-551
ATGGCCCTTCCACACGGGACCACCGGATCA526CTATGACCGATTTAGTGAGGGTTAATA
DD-P25-2.2 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779687.1:27-52
ATTAACCCTCACTAAAGATCTGACTG27CTATGACCGATTTAGTGAGGGTTAATAAGCCGAATTCCAGCACACTGGCGGCCGTT
DD-P27-1.2 Sugar Beet differential display cDNA Beta vulgaris cDNA similar to Reductase-like protein, mRNA sequence.
CX779698.1:430-455
CTTGACTCAGTTACACTCTTGGGAAGGACA430CTATGACCGATTTAGTGAGGGTTAATA
DD-P26-2.1 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779700.1:297-322
AGTCAATCAATACAACTAGGATTAATCTTT297CTATGACCGATTTAGTGAGGGTTAATA
DDB12 Oreochromis niloticus adult liver Oreochromis niloticus cDNA clone DDB12, mRNA sequence.
GH335073.1:426-451
AGTGCTTTTGGTGTGTGTTAATGCGAGCTG426CTATGACCGATTTAGTGAGGGTTAAT
PRABD_01 Differentially expressed genes during needle maturation Pinus radiata cDNA, mRNA sequence.
GO270982.1:485-510
ATAGTTTTGGTCTGTATATTCATAATGATA485CTATGACCGATTTAGTGAGGGTTAATAATC
PRABD_03 Differentially expressed genes during needle maturation Pinus radiata cDNA, mRNA sequence.
GO270984.1:348-373
AGCAGGATGTGGGATTCTTTGACACGGATG348CTATGACCGATTTAGTGAGGGTTAATAAT
JZS119e chicken breast blister (keel cyst) related genes Gallus gallus cDNA clone JZS119 5', mRNA sequence.
GW317170.1:132-157
AGAGTACTAAGAGGGGAGTTGAGATTTGGT132CTATGACCGATTTAGTGAGGGTTAAT
JZS119f chicken breast blister (keel cyst) related genes Gallus gallus cDNA clone JZS119 5', mRNA sequence.
GW317171.1:133-158
ATTTTTTTTTTTTGGCTGTGTATCTGAGCG133CTATGACCGATTTAGTGAGGGTTAAT
JZS119g chicken breast blister (keel cyst) related genes Gallus gallus cDNA clone JZS119 5', mRNA sequence.
GW317172.1:133-158
ATTTTTTTTTTTTGGCTGTGTATCTGAGCG133CTATGACCGATTTAGTGAGGGTTAAT
JZS119h chicken breast blister (keel cyst) related genes Gallus gallus cDNA clone JZS119 5', mRNA sequence.
GW836603.1:132-157
TATTTTTTTTTTTGGCTGTGTATCTGAGCG132CTATGACCGATTTAGTGAGGGTTAAT
Sequence 2 from patent US 6593084.
AR353563.1:1-26
1ATTAACCCTCACTAAATCGGTCATAG
Sequence 28 from Patent WO0240666.
AX431395.1:1-26
1ATTAACCCTCACTAAATCGGTCATAG
JP 2004512852-A/19: Fat Regulated Genes, Uses Thereof, and Compounds for Modulating Same.
DD010081.1:1-26
1ATTAACCCTCACTAAATCGGTCATAG
JP 2003235570-A/2: Polypeptide having interaction with hibernation-specific protein and its utilization.
DJ389550.1:1-26
1ATTAACCCTCACTAAATCGGTCATAG
Sequence 10 from patent US 8349562.
GZ703047.1:1-26
1ATTAACCCTCACTAAATCGGTCATAG
Sequence 10 from patent US 9109258.
HL076159.1:1-26
1ATTAACCCTCACTAAATCGGTCATAG
EST00002 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoU2-2 5', mRNA sequence.
CB252004.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGATATAGGCAAGTACAGCCAGTCTGATAGTT
EST00004 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoD2-1 5', mRNA sequence.
CB252006.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGAGAGTGAGAGAGTGAGAGAGAGAGAGAGAG
EST00005 Tripsacum dactyloides caryopsis Differential Display Tripsacum dactyloides cDNA clone ApoD5-5 5', mRNA sequence.
CB252007.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGC
5 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Ou211, mRNA sequence.
CB275455.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGTGAATGAGACAGAGAGAAAGAAATAAGTGC
6 Differentially expressed Dermacentor variabilis cDNA fragments Dermacentor variabilis cDNA clone Oi212, mRNA sequence.
CB275456.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGAAACAGCAGAGCTTCAACCAGGAGAAATTG
EST0108 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991368.1:12-37
CACTAGTGATT12ATTAACCCTCACTAAATCGGTCATAGCAGCAGTTGAGCTCATAGCAGAAGAGTCCG
EST0953 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991439.1:19-44
GCGAATTCACTAGTGATT19ATTAACCCTCACTAAATCGGTCATAGACTATATAGTTCATAGTTAATCATGTTCAT
EST0954 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991440.1:19-44
GCGAATTCACTAGTGATT19ATTAACCCTCACTAAATCGGTCATAGAAAGAACCCCCATCGGGGAGTGAAATAGAA
54-37 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605642.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGATCTAAAACTAAAATCTAGAGAAAATACAG
54-47 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605652.1:2-27
T2ATTAACCCTCACTAAATCGGTCATAGAAAAGAATGAAACAATGCAATTTACAACAA
DD11-39 Tobacco ESTs characterized by a hypersensitive response specific pattern of expression library Nicotiana tabacum cDNA clone DD11-39 similar to C3HC4-type RING domain containing protein (RDCP1)
CV507095.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGAGTGGAATCAAGGTTTTTTGTGAAACTTCA
DD-L26-1a Sugar Beet differential display cDNA Beta vulgaris cDNA similar to Folate-binding protein, mRNA sequence.
CX779671.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGTTTGTTTGATGGTACCTGCTACTCGGATAA
DD-L18-3 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779675.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGACTAAATGAAAACAACTCAATAAGTAAACA
DD-L21-2 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779678.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGCACAGGTGTACATTAAACTTCAACTACATA
DD-L21-3 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779679.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGCCCCGATTCCCATTTCGGGATTTCCTCTGC
DD-L22-4 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779681.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGTGCGAAAAGAAGGATCTCGATCGGAACTGT
DD-L30-2 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779682.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGTTTTTCAGGATATACACAGAAAATATGGTC
DD-P28-1.3 Sugar Beet differential display cDNA Beta vulgaris cDNA similar to Probable folate binding protein, mRNA sequence.
CX779697.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGTTTGTTTGATGGTACCTGCTACTCGGATAA
DD-P26-6.2 Sugar Beet differential display cDNA Beta vulgaris cDNA, mRNA sequence.
CX779699.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGCCCTTCCTTCCTAACATTATAATTATCGGC
cembA02 Differential display of COTTON GENOTYPE, leaf Gossypium arboreum cDNA clone P2T1-4 3', mRNA sequence.
EE298191.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGCAGAGATATTTGCTTGCACTGTTGGGCAAA
Carica papaya ripening induced down-regulated cDNA clone DD-9 Induced ripening papaya pulp Carica papaya cDNA clone DD-9 similar to Ribonuclease III family protein, mRNA sequence.
FK759822.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGCTAAAACCGAGGATGCTCATAACTTATATT
Dendrobium grex Madame Thong-IN putative transcriptional repressor (ovg27) mRNA, partial cds.
AF100331.1:1-26
1ATTAACCCTCACTAAATCGGTCATAGCCACATGTTGGCAAGCAATGTTCGACGAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTATGACCGATTTAGTGAGGGTTAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTATGACCGATTTAGTGAGGGTTAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.472 | 1.462 | search_plus_done; http://172.18.8.135:50800/match?q=CTATGACCGATTTAGTGAGGGTTAAT&k=0&no_gap=0&offset=0&limit=50
2.331 | 0.859 | search_minus_done; http://172.18.8.135:50800/match?q=ATTAACCCTCACTAAATCGGTCATAG&k=0&no_gap=0&offset=0&limit=21
2.350 | 0.020 | cgi_end;

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