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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:00:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST0981 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_07_44.M13+_D06.ab1, mRNA sequence.
GE650654.1:549-569
ATCAGACAGCTCAATAATGGCAGTATAGTA549CTATGATGCCTCCTTCAGTTTGTCACCCTCCTTCTCTTCATGGTTTGATAT
EST1482 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_14_13.M13+_E02.ab1, mRNA sequence.
GE651155.1:551-571
ATCAGACAGCTCAATAATGGCAGTATAGTA551CTATGATGCCTCCTTCAGTTTGTCACCCTCCTTCTCTTCACGGTTTGATAT
EST2608 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_28_73.M13+_A10.ab1, mRNA sequence.
GE652281.1:550-570
ATCAGACAGCTCAATAATGGCACTATAGTA550CTATGATGCCTCCTTCAGTTTGTCACCCTCCTTCTCTTCATGGTTTGATAT
EST3417 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone OUYI_CG_71.M13+_G09, mRNA sequence.
GE653090.1:551-571
ATCAGACAGCTCAATAATGGCAGTATAGTA551CTATGATGCCTCCTTCAGTTTGTCACCCTCCTTCTCTTCATGGTTTGATAT
Acentria ephemerella genome assembly, chromosome: 5.
OW971879.1:6912849-6912869
CTTTGATAAGTTGGTCAATGTGCCTGTTGA6912849CTATGATGCCTCCTTCAGTTTCTACTTTATAGTTCGCTGGGCCAATTCTAT
Caprimulgus europaeus genome assembly, chromosome: 1.
OU015523.1:5798832-5798852
ACTTGAAGCAGGACATGCAACAAGGAGTGG5798832AAACTGAAGGAGGCATCATAGCATTTTCCTTCTAGCAGAACCAAATCCTGT
TSA: Camellia sinensis Singletons125416.Casi mRNA sequence.
HP728982.1:44-64
ATATCAAACCATGAAGAGAAGGAGGGTGAC44AAACTGAAGGAGGCATCATAGTACTATACTGCCATTATTGAGCTGTCTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTATGATGCCTCCTTCAGTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTATGATGCCTCCTTCAGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.557 | 0.548 | search_plus_done; http://172.18.8.135:50400/match?q=CTATGATGCCTCCTTCAGTTT&k=0&no_gap=0&offset=0&limit=50
0.665 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=AAACTGAAGGAGGCATCATAG&k=0&no_gap=0&offset=0&limit=45
0.667 | 0.002 | cgi_end;

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