GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:21:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence.
AC122458.3:39937-39955
GCTGCTAAAGGGAATCTATGAGAATATGCA39937CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus BAC clone RP24-467P6 from chromosome 8, complete sequence.
AC132948.3:156968-156986
GCTGCTAAAGGGAATCTATGAGAATATGCA156968CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971571.1:30303490-30303508
GCTGCTAAAGGGAATCTATGAGAATATGCA30303490CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971582.1:30339444-30339462
GCTGCTAAAGGGAATCTATGAGAATATGCA30339444CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971603.1:30573273-30573291
GCTGCTAAAGGGAATCTATGAGAATATGCA30573273CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus domesticus genome assembly, chromosome: 8.
OW971629.1:31138357-31138375
GCTGCTAAAGGGAATCTATGAGAATATGCA31138357CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971645.1:30353830-30353848
GCTGCTAAAGGGAATCTATGAGAATATGCA30353830CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus molossinus genome assembly, chromosome: 8.
OW971665.1:37979247-37979265
GCTGCTAAAGGGAATCTATGAGAATATGCA37979247CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus spretus genome assembly, chromosome: 8.
OW971687.1:30891229-30891247
GCTGCTAAAGGGAATCTATGAGAATATGCA30891229CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971716.1:29569397-29569415
GCTGCTAAAGGGAATCTATGAGAATATGCA29569397CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971729.1:30308324-30308342
GCTGCTAAAGGGAATCTATGAGAATATGCA30308324CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971750.1:30810470-30810488
GCTGCTAAAGGGAATCTATGAGAATATGCA30810470CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus musculus genome assembly, chromosome: 8.
OW971771.1:30205528-30205546
GCTGCTAAAGGGAATCTATGAGAATATGCA30205528CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971792.1:30387541-30387559
GCTGCTAAAGGGAATCTATGAGAATATGCA30387541CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971812.1:36265772-36265790
GCTGCTAAAGGGAATCTATGAGAATATGCA36265772CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus castaneus genome assembly, chromosome: 8.
OW971842.1:30481316-30481334
GCTGCTAAAGGGAATCTATGAGAATATGCA30481316CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OW971862.1:30516511-30516529
GCTGCTAAAGGGAATCTATGAGAATATGCA30516511CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OX389802.1:43516170-43516188
GCTGCTAAAGGGAATCTATGAGAATATGCA43516170CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OX390152.1:39915722-39915740
GCTGCTAAAGGGAATCTATGAGAATATGCA39915722CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
Mus musculus genome assembly, chromosome: 8.
OX439023.1:35004308-35004326
GCTGCTAAAGGGAATCTATGAGAATATGCA35004308CTATGCTCCCACGCCTTTTTCCCCTTTCCCCTACCCTCCTTCCCTTACT
atr02-3ms2-h10 Atr02 Amborella trichopoda cDNA clone atr02-3ms2-h10 5', mRNA sequence.
CK758501.1:384-402
AGCAGCGACTCAAAGCTCTTCAGCTATATC384CTATGCTCCCACGCCTTTTGGAATTTGGGCACTAATTCTGGTTTGTTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTATGCTCCCACGCCTTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTATGCTCCCACGCCTTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.151 | 0.142 | search_plus_done; http://172.18.8.135:50400/match?q=CTATGCTCCCACGCCTTTT&k=0&no_gap=0&offset=0&limit=50
0.176 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=AAAAGGCGTGGGAGCATAG&k=0&no_gap=0&offset=0&limit=29
0.176 | 0.000 | cgi_end;

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