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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-20 06:53:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

mte1-21D21RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR302896.1:621-642
AAGGGCTGTATGTCTCTAGATATTTTTCAT621CTATGGTTTGCCGAAGGATTTGTTTCTGGAGAGAAACAGCACCACCATCTCT
Medicago truncatula strain A17 clone mth2-39d21, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC231339.3:23247-23268
AAGGGCTGTATGTCTCTAGATATTTTTCAT23247CTATGGTTTGCCGAAGGATTTGTTTCTGGAGAGAAACAGCACCACCATCTCT
Medicago truncatula clone mth2-35d19, complete sequence.
AC143337.27:48936-48957
AAGGGCTGTATGTCTCTAGGTTTTTTTCAT48936CTATGGTTTGCCGAAGGATTTGTTTCTGTACAGCAGTAGCACCGCCATCTTT
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:49374650-49374671
AAGGGCTGTATGTCTCTAAGTTTTTTTCAT49374650CTATGGTTTGCCGAAGGATTTGTTTCTTTACAGCAGTAGCACCACCCTCTTT
Trifolium repens isolate ACLI19 chromosome 06_Pall.
CP125847.1:49356543-49356564
AAGGGCTGTATGTCTCTAGGTTTTTCTCAT49356543CTATGGTTTGCCGAAGGATTTGTTTCTTTACAGCAGTAGCACCACCGTCATT
Trifolium repens isolate ACLI19 chromosome 06_Pall.
CP125847.1:49384464-49384485
AAGGGCTGTATGTCTCTAAGTTTTTTTCAT49384464CTATGGTTTGCCGAAGGATTTGTTTCTTTACAGCAGTAGCACCGCCTTCTTT
Medicago arabica genome assembly, chromosome: 8.
OX326971.1:30408647-30408668
AAGGGTTGTATGTCTCTAGATTTTTTTCAT30408647CTATGGTTTGCCGAAGGATTTGTTTCTTTACAGCAGTAGCACCAAACTGATA
Medicago arabica genome assembly, chromosome: 8.
OX326971.1:46579925-46579946
AAGAGCTGTATGTCTCTAGGTTTTCTTCAT46579925CTATGGTTTGCCGAAGGATTTGTTTCTTTACAGCAGTAGCACCACCATCTTT
T110469e KV0 Medicago truncatula cDNA clone pKV0-1G2, mRNA sequence.
AI974519.1:366-387
GAGATGGTGGNTGCTGTTTCTCTCCAGAAA366CAAATCCTTCGGCAAACCATAGATGAAAAATATCTAGAGACATACAGCCCTT
EST610654 KVKC Medicago truncatula cDNA clone pKVKC-1D8, mRNA sequence.
BQ164785.1:344-365
AGAGATGGTGGTGCTGTTTCTCTCCAGAAA344CAAATCCTTCGGCAAACCATAGATGAAAAATATCTAGAGACATACAGCCCTT
s13dNF65A09MJ065_270647 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX532173.1:230-251
AGAGATGGTGGTGCTGTTTCTCTCCAGAAA230CAAATCCTTCGGCAAACCATAGATGAAAAATATCTAGAGACATACAGCCCTT
Medicago truncatula clone mth2-34m6, complete sequence.
AC138015.24:85963-85984
AAAGATGGCGGTGCTACTGCTGTACAGAAA85963CAAATCCTTCGGCAAACCATAGATGAAAAAAACCTAGAGACATACAGCCCTT
Vicia faba genome assembly, chromosome: 2.
OX451737.1:666897250-666897271
AAAGATGGTGGTGCTACTGCTGTACAGATA666897250CAAATCCTTCGGCAAACCATAGATGGAATAAATCTAGAGACATACAGCCCTT
Vicia faba genome assembly, chromosome: 2.
OX451737.1:666947189-666947210
AAAGATGGTGGTGCTACTGCTGTACAGATA666947189CAAATCCTTCGGCAAACCATAGATGGAATAAATCTAGAGACATACAGCCCTT
Vicia faba genome assembly, chromosome: 3.
OX451738.1:705639116-705639137
AAAGATGGTGGTGCTACTGCTGTACAGATA705639116CAAATCCTTCGGCAAACCATAGATGAAATAAATCTAGAGACATACAGCCCTT
Trifolium dubium genome assembly, chromosome: 7.
OX638068.1:6975515-6975536
AGAGATGGTGGTGCTATTGCTATACAGAAA6975515CAAATCCTTCGGCAAACCATAGATGAAATAAATCTAGAGACATACAGCCCTT
Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:9857059-9857080
AAAGACGGTGGTGCTACTGCTGTAAATAAA9857059CAAATCCTTCGGCAAACCATAGATGAAAAAAACTTAGATACATACAGCCCTT
Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:9864088-9864109
AAAGATGGCGGTGCTACTGCTGTACAGAAA9864088CAAATCCTTCGGCAAACCATAGATGAAATGAATTTAGAGACATACAGCCCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTATGGTTTGCCGAAGGATTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTATGGTTTGCCGAAGGATTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.521 | 0.513 | search_plus_done; http://172.18.8.135:50400/match?q=CTATGGTTTGCCGAAGGATTTG&k=0&no_gap=0&offset=0&limit=50
0.801 | 0.280 | search_minus_done; http://172.18.8.135:50400/match?q=CAAATCCTTCGGCAAACCATAG&k=0&no_gap=0&offset=0&limit=42
0.808 | 0.006 | cgi_end;

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