GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-17 11:42:09, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Rhinolophus hipposideros genome assembly, chromosome: 13.
OZ077430.1:62037094-62037115
CTCCATTTTAAAATGAGAAAAGCTTATTAC62037094AAAAGGGTTCAAAATAGAATAGATATTAAATTAGAAGTTACCTTACAGACCA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT14P20, TM0087.
AP004534.1:108427-108448
CAAGGAAACAGTAACTCACATGCTTCATAA108427AAAAGGGTTCAAAATAGAATAGAATAGAATAGAATAGAATGTATCAACTGAT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:60679227-60679248
CAAGGAAACAGTAACTCACATGCTTCATAA60679227AAAAGGGTTCAAAATAGAATAGAATAGAATGTATCAACTGATTAAAATAAAT
Lissotriton vulgaris genome assembly, chromosome: 5.
OZ183357.1:1799614309-1799614330
GCCTGTCAGAGGACTTCCTCACTGGAAATT1799614309AAAAGGGTTCAAAATAGAATAGTCTAAATGAAATGATCTTACAAGGTGTGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTATTCTATTTTGAACCCTTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTATTCTATTTTGAACCCTTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.191 | 0.182 | search_plus_done; http://172.18.8.135:50800/match?q=CTATTCTATTTTGAACCCTTTT&k=0&no_gap=0&offset=0&limit=50
0.348 | 0.157 | search_minus_done; http://172.18.8.135:50800/match?q=AAAAGGGTTCAAAATAGAATAG&k=0&no_gap=0&offset=0&limit=50
0.351 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).