GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 16:04:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

WS00742.C21_D16 WS-PS-N-A-8 Picea glauca cDNA clone WS00742_D16 3, mRNA sequence.
DR576013.1:515-534
CAAAGAATGGCTGCAACAACACATGACCCA515CTATTCTCACACCACTCATCGTCTCCTCCGCCGCCGCCGCCGCCGAGAGC
GQ03903.SP6.r_A13 GQ039 - Stem - Dormant Picea glauca cDNA clone GQ03903_A13 3', mRNA sequence.
GO368994.1:530-549
CAAAGAATGGCTGCAACAACACATGACCCA530CTATTCTCACACCACTCATCGTCTCCTCCTCCGCCGCCGCCGCCGCCGAG
Catocala nupta genome assembly, chromosome: 1.
OY776079.1:4632436-4632455
ATAGAGAAGTGTATGAGAAGTAGCGTAAGA4632436CTATTCTCACACCACTCATCATCATCATCACTTTTCATTTTCTTTACCTT
Mobula hypostoma genome assembly, chromosome: 2.
OY992593.1:28142278-28142297
GGCATGCTATGAGTATGTGAAGAACAAGAG28142278GATGAGTGGTGTGAGAATAGTACAAATCAGAAGCAATAGTGGAATTATGT
GQ03903.B7_A13 GQ039 - Stem - Dormant Picea glauca cDNA clone GQ03903_A13 5', mRNA sequence.
EX429656.1:714-733
CTCGGCGGCGGCGGCGGCGGAGGAGGAGAC714GATGAGTGGTGTGAGAATAGTGGGTCATGTGTTGTTGCAGCCATTCTTT
Picea glauca clone GQ03903_A13 mRNA sequence.
BT117552.1:714-733
CTCGGCGGCGGCGGCGGCGGAGGAGGAGAC714GATGAGTGGTGTGAGAATAGTGGGTCATGTGTTGTTGCAGCCATTCTTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTATTCTCACACCACTCATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTATTCTCACACCACTCATC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.227 | 0.218 | search_plus_done; http://172.18.8.135:50400/match?q=CTATTCTCACACCACTCATC&k=0&no_gap=0&offset=0&limit=50
0.319 | 0.092 | search_minus_done; http://172.18.8.135:50400/match?q=GATGAGTGGTGTGAGAATAG&k=0&no_gap=0&offset=0&limit=47
0.321 | 0.002 | cgi_end;

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