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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 09:52:48, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cucumis melo subsp. melo EST, clone PSI_21-A06-M13R.
AM722678.2:9-26
TCTTCAAC9CTCAACGAGTCGCCCAAGCGAGTTTTAGAGAGAGATAGAGAGAGAGAG
Acytostelium subglobosum cDNA, clone: asdv17f13, 3'-end sequence, developmental stage.
HY496939.1:352-369
AAAGCAATGGGACAGACAATGGTGTCGATG352CTCAACGAGTCGCCCAAGCATTGGTATGTGTATCCGTACCATGGCACG
EST11035714 MNRP2 library Cucumis melo cDNA clone CA13YP23FM1, mRNA sequence.
JG494001.1:10-27
GTCTTCAAC10CTCAACGAGTCGCCCAAGCGAGTTTTAGAGAGAGATAGAGAGAGAGAG
EST11048503 DFLP2 library Cucumis melo cDNA clone EA8YD16FM1, mRNA sequence.
JG506790.1:10-27
GTCTTCAAC10CTCAACGAGTCGCCCAAGCGAGTTTTAGAGAGAGATAGAGAGAGAGAG
EST11055905 MNCP2 library Cucumis melo cDNA clone KA10YJ20FM1, mRNA sequence.
JG514192.1:10-27
GTCTTCAAC10CTCAACGAGTCGCCCAAGCGAGTTTTAGAGAGAGATAGAGAGAGAGAG
EST11078916 VFLP2 library Cucumis melo cDNA clone GA52YM07FM1, mRNA sequence.
JG537203.1:10-27
GTCTTCAAC10CTCAACGAGTCGCCCAAGCGAGTTTTAGAGAGAGATAGAGAGAGAGAG
Colletotrichum gigasporum strain JS-0367 chromosome III.
CP077949.1:7071670-7071687
AGTTGGAGACAGATCCAGCAAGAGCCAAGA7071670CTCAACGAGTCGCCCAAGATACCTTGTGGCGGCCGTGCCATCCCGGCC
Ustilago hordei strain Uh805 chromosome 16.
CP094222.1:424344-424361
GCCGGCAAGGCAATGAGTCCTTCTGGCGGG424344CTCAACGAGTCGCCCAAGGTTGCTCCGTCGCCCGCTCAGCCGGAAGAC
Lactuca sativa isolate DNAHIFI_1 chromosome 4.
CP154644.1:60493951-60493968
GAGTCTAGGGGGTCATTGGACACGCATAGA60493951CTCAACGAGTCGCCCAAGTGCACTCGGCGAGTCGGGTCAAAGTTTGAC
Cucumis melo genomic scaffold, anchoredscaffold00080.
LN681929.1:320359-320376
TCAGTACCCACTCACTTGATCGTCTTCAAC320359CTCAACGAGTCGCCCAAGCGAGTTTTAGTAGAGAGATAGAGAGAGAGA
Cucumis melo genomic chromosome, chr_12.
LN713266.1:13111636-13111653
TCAGTACCCACTCACTTGATCGTCTTCAAC13111636CTCAACGAGTCGCCCAAGCGAGTTTTAGTAGAGAGATAGAGAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828136.1:447325431-447325448
TATTGAAAGTATGGATCTTTATTTTTATTC447325431CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828185.1:426884594-426884611
TATTGAAAGTATGGATCTTTATTTTTATTC426884594CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828277.1:437066882-437066899
TATTGAAAGTATGGATCTTTATTTTTATTC437066882CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX459927.1:427570247-427570264
TATTGAAAGTATGGATCTTTATTTTTATTC427570247CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460016.1:426092332-426092349
TATTGAAAGTATGGATCTTTATTTTTATTC426092332CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460170.1:432000826-432000843
TATTGAAAGTATGGATCTTTATTTTTATTC432000826CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460212.1:419756103-419756120
TATTGAAAGTATGGATCTTTATTTTTATTC419756103CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX638657.1:425093465-425093482
TATTGAAAGTATGGATCTTTATTTTTATTC425093465CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX638788.1:422227857-422227874
TATTGAAAGTATGGATCTTTATTTTTATTC422227857CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Hordeum vulgare genome assembly, chromosome: 5H.
OX638823.1:423349500-423349517
TATTGAAAGTATGGATCTTTATTTTTATTC423349500CTCAACGAGTCGCCCAAGCATGGACGCTATCTATACCAAAGAGCTTAA
Streptomyces sp. NBC_01304 chromosome, complete genome.
CP109055.1:2311557-2311574
CCCGACCGCTTCGGTCCGGACGCGGCCCGG2311557CTCAACGAGTCGCCCAAGGTCGACAACGACCTCTACGTCCGCGACTAC
Pseudomonas sp. NA-150 chromosome, complete genome.
CP172305.1:5079772-5079789
AACCTGGGCAAGGACTCGCTGGATAAAATG5079772CTCAACGAGTCGCCCAAGGTCGCGGCAAAAATCATTCGGGCGATTGCC
Caligus rogercresseyi isolate FCH chromosome 4.
CP045893.1:26631029-26631046
AAAAATAAATAAATAAATAATAATGAAGCT26631029CTCAACGAGTCGCCCAAGCCAACCATATTATTGTTATTCCTCTTCAGC
Exephanes ischioxanthus genome assembly, chromosome: 11.
OY294025.1:2564690-2564707
GCCGTTCCTCATCAAACGCCGCAACCGTTT2564690CTCAACGAGTCGCCCAAGATTGACGCGATATTGTCGCACTCTTGACAA
Cryptocephalus primarius genome assembly, chromosome: 7.
OY754943.1:12646726-12646743
GACAGAAAGAGACAGACAAAATAAGAAAAG12646726CTCAACGAGTCGCCCAAGGAAAATAAGAAGAAGCTATTTTAATACCGT
Phaonia angelicae genome assembly, chromosome: 4.
OZ217473.1:49487723-49487740
CGCAGCGAGTCGTCATTGAGTGGTCCTATA49487723CTCAACGAGTCGCCCAAGAAATTAACAACTGCGCCAAAACCAACGCGT
Borostomias antarcticus genome assembly, chromosome: 22.
OX465225.1:8554570-8554587
CTACCCGTTCGCCATTGGCTCAACGAGTAA8554570CTCAACGAGTCGCCCAAGTAGAGGATGGAATGGCTGTTCACACCCGGT
Torulaspora globosa strain CBS764 chromosome 5.
CP059250.1:256915-256932
GTCCTTTCTCCGGCATCTCATCAGTGCTTC256915CTTGGGCGACTCGTTGAGCTGCAACAGGTAATTCACGAGACCGTCCAT
Cucumis melo isolate PI 511890 chromosome 12.
CP136108.1:13988467-13988484
CTCTCTCTCTCTATCTCTCTCTAAAACTCG13988467CTTGGGCGACTCGTTGAGGTTGAAGACGATGAAGTGAGTGGGTACTGA
Hyocomium armoricum genome assembly, chromosome: 1.
OZ174020.1:17488499-17488516
GTATTGAATTGAAAGATATTGTGGCTTGTC17488499CTTGGGCGACTCGTTGAGGGCTTGCCTGATGTGTCCGTCCTTTTTCAC
Calothrix sp. PCC 7507 chromosome, complete genome.
CP003943.1:3068075-3068092
ATTTCAGTTCGGGAAATTGTCGCGCTAATT3068075CTTGGGCGACTCGTTGAGTCCCGCTACCAAAGAATTTGAGGTAGGGGG
Planctomycetales bacterium 10988 chromosome, complete genome.
CP043547.1:1471578-1471595
AACGATCTTCGGGATGCCACAACGGTAAAC1471578CTTGGGCGACTCGTTGAGCGAGAATGTCTAACTTTTCATTCGACCCAG
Aplidium turbinatum genome assembly, chromosome: 15.
OU964932.1:13000389-13000406
AGTGTTTCGATGTGAGATCTTGAAAAATTA13000389CTTGGGCGACTCGTTGAGTAGCTGACATAGCAATGTAGCCTACGTTGA
Caenorhabditis monodelphis genome assembly, chromosome: I.
OZ078261.1:12684245-12684262
ACACGTGTCGTGCGTGTAGATCTTCTTGGT12684245CTTGGGCGACTCGTTGAGGTTCTCGAATTCGCGCCGAATGAACGCATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCAACGAGTCGCCCAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCAACGAGTCGCCCAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.749 | 0.740 | search_plus_done; http://172.18.8.135:50800/match?q=CTCAACGAGTCGCCCAAG&k=0&no_gap=0&offset=0&limit=50
0.848 | 0.099 | search_minus_done; http://172.18.8.135:50800/match?q=CTTGGGCGACTCGTTGAG&k=0&no_gap=0&offset=0&limit=22
0.852 | 0.005 | cgi_end;

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