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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 06:43:32, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

1092351008821 Global-Ocean-Sampling_GS-34-01-01-1P5-1P8KB marine metagenome genomic clone 1061001558425 3', genomic survey sequence.
ER354271.1:794-813
AACGACGGCAAACGACATGGGTTGCCACCA794CTCAGAAACCCTTCCACCAAGCTCAATATTTCTTTGATAAAAATCTACGC
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:6652040-6652059
TCTAATTTCTTCAATAAAACCTTAGCGTTC6652040CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTCCATTCATT
Citrullus lanatus cultivar Allsugar chromosome 1.
CP155009.1:33347351-33347370
TCCACTTTCTTCAACAAAACCCTAGCGTTC33347351CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar Charleston Gray chromosome 1.
CP155142.1:33531174-33531193
TCCACTTTCTTCAACAAAACCCTAGCGTTC33531174CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar Calhoun Gray chromosome 1.
CP155153.1:33506700-33506719
TCCACTTTCTTCAACAAAACCCTAGCGTTC33506700CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar PKR6 chromosome 1.
CP155164.1:33610990-33611009
TCCACTTTCTTCAACAAAACCCTAGCGTTC33610990CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar Sugarlee chromosome 1.
CP155175.1:33505925-33505944
TCCACTTTCTTCAACAAAACCCTAGCGTTC33505925CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar ShiHongNo2 chromosome 1.
CP155186.1:33529362-33529381
TCCACTTTCTTCAACAAAACCCTAGCGTTC33529362CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar PI 288522 chromosome 1.
CP155197.1:33410051-33410070
TCCACTTTCTTCAACAAAACCCTAGCGTTC33410051CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar DaBanHongZiGua chromosome 1.
CP155208.1:33375388-33375407
TCCACTTTCTTCAACAAAACCCTAGCGTTC33375388CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar PI 381740 chromosome 1.
CP155219.1:33236349-33236368
TCCACTTTCTTCAACAAAACCCTAGCGTTC33236349CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar SanBaiGua chromosome 1.
CP155230.1:33227277-33227296
TCCACTTTCTTCAACAAAACCCTAGCGTTC33227277CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar PI 254622 chromosome 1.
CP155241.1:33505349-33505368
TCCACTTTCTTCAACAAAACCCTAGCGTTC33505349CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus cultivar HeiShanRen chromosome 1.
CP155252.1:33258954-33258973
TCCACTTTCTTCAACAAAACCCTAGCGTTC33258954CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus amarus cultivar PI 296341-FR chromosome 1.
CP155263.1:34008813-34008832
TCCACTTTCTTCAACAAAACCCTAGCGTTC34008813CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus amarus cultivar PI 189225 chromosome 1.
CP155274.1:34757833-34757852
TCCACTTTCTTCAACAAAACCCTAGCGTTC34757833CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus amarus cultivar RCAT 055816 chromosome 1.
CP155285.1:34252001-34252020
TCCACTTTCTTCAACAAAACCCTAGCGTTC34252001CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus amarus cultivar PI 271769 chromosome 1.
CP155296.1:34007877-34007896
TCCACTTTCTTCAACAAAACCCTAGCGTTC34007877CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus subsp. mucosospermus cultivar PI 595203 chromosome 1.
CP155307.1:33584108-33584127
TCCACTTTCTTCAACAAAACCCTAGCGTTC33584108CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus amarus cultivar PI 482276 chromosome 1.
CP155318.1:34393199-34393218
TCCACTTTCTTCAACAAAACCCTAGCGTTC34393199CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus lanatus subsp. mucosospermus cultivar PI 532732 chromosome 1.
CP155329.1:34337769-34337788
TCCACTTTCTTCAACAAAACCCTAGCGTTC34337769CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus colocynthis cultivar PI 537300 chromosome 4.
CP155343.1:33575616-33575635
TCCACTTTCTTCAACAAAACCCTAGCGTTC33575616CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus colocynthis cultivar PI 525081 chromosome 4.
CP155354.1:33445196-33445215
TCCACTTTCTTCAACAAAACCCTAGCGTTC33445196CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus naudinianus cultivar PI 596694M chromosome 4.
CP155365.1:31127221-31127240
TCTACTTTCTTCAACAAAACCCTAGCGTTC31127221CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus colocynthis cultivar PI 652554 chromosome 4.
CP155376.1:31598666-31598685
TCCACTTTCTTCAACAAAACCCTAGCGTTC31598666CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus colocynthis cultivar PI 632755 chromosome 4.
CP155387.1:33491228-33491247
TCCACTTTCTTCAACAAAACCCTAGCGTTC33491228CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus rehmii cultivar PI 670011 chromosome 4.
CP155398.1:35451346-35451365
TCCACTTTCTTCAACAAAACCCTAGCGTTC35451346CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Citrullus ecirrhosus cultivar PI 673135 chromosome 4.
CP155409.1:36965522-36965541
TCCACTTTCTTCAACAAAACCCTAGCGTTC36965522CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Cucumis melo genomic scaffold, anchoredscaffold00007.
LN681875.1:6671268-6671287
TCTAATTTCTTCAATAAAACCTTAGCGTTC6671268CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTCCATTCATT
Cucumis melo genomic chromosome, chr_8.
LN713262.1:6671268-6671287
TCTAATTTCTTCAATAAAACCTTAGCGTTC6671268CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTCCATTCATT
Citrullus colocynthis genome assembly, chromosome: 4.
OZ021738.1:31579692-31579711
TCCACTTTCTTCAACAAAACCCTAGCGTTC31579692CTCAGAAACCCTTCCACCAATTCCTTGTTCAATCTGCAGTTTCATTCATT
Adonis annua genome assembly, chromosome: 4.
OZ123179.1:873181593-873181612
TACCACCACCACCATCTTACACATCACCAT873181593CTCAGAAACCCTTCCACCAAAATCAAATTCAGAAATCTTATTTTCACAAG
Glyphotaelius pellucidus genome assembly, chromosome: 19.
OW386556.1:28504773-28504792
GCTAACAATTTTCTGCTTCTTCTCTCAGTG28504773CTCAGAAACCCTTCCACCAACTCAGAAGTGGGATTCCGGGGTATTTTATT
Schoenobius gigantella genome assembly, chromosome: 12.
OZ012552.1:24834202-24834221
AGGTAAGACGGTGGTAGCTAGCCAGGCGGG24834202CTCAGAAACCCTTCCACCAACCAAACCGAGCAGAAAAATTTCTGCCCCCA
Schoenobius gigantella genome assembly, chromosome: 13.
OZ012553.1:24953695-24953714
GAGTAAGGCAGCAGAAGTAAGCCAAGCGGG24953695CTCAGAAACCCTTCCACCAATCAAATCAAGCAAAAAAACTTCTATCCCAA
Schoenobius gigantella genome assembly, chromosome: 13.
OZ012553.1:28387616-28387635
TATGCCGACAATCTCAGATAAGCCAGCCCG28387616CTCAGAAACCCTTCCACCAACCAAACCAAGCAGAAAAACTTTTGCCTCTT
Erebia meolans genome assembly, chromosome: 5.
OZ186232.1:8220898-8220917
TTTGCTGAAGGAGTCAAAGGGGTCCTTAGT8220898CTCAGAAACCCTTCCACCAACACGCATCACCAGAGCCTTATAAAATCGAA
Scyliorhinus canicula genome assembly, chromosome: 25.
LR744054.1:5354099-5354118
TTCTCCGCGTTTCAATGGGCTGCTAATCAG5354099CTCAGAAACCCTTCCACCAATTCCCCACTGACCCCATAAGGGAACAGTGT
Raja brachyura genome assembly, chromosome: 5.
OY740785.1:21516508-21516527
ACCTCTGCTTTACAACAGTCCAATGCTGGG21516508CTCAGAAACCCTTCCACCAAAAACATCCTGCACACCGGTTTCAACTCCTT
Mobula hypostoma genome assembly, chromosome: 3.
OY992594.1:217170065-217170084
CTAAACTCCAAACAGCAACGCTCTCAGGAT217170065CTCAGAAACCCTTCCACCAAGACAATGTGACGAATCTCGGAGAAGAGGTT
Chionomys nivalis genome assembly, chromosome: 8.
OX465456.1:50394078-50394097
CCGGCTGTTGCTCCTTGTGAACATGGACGA50394078TTGGTGGAAGGGTTTCTGAGCCCTGATCAGATTGCGAACCCGCCGCTGCT
Cucumis melo subsp. melo EST, clone HS_08-A12-M13R.
AM724103.1:558-577
AGTTTCTGCCAAATTCAATTGAACAAGGAA558TTGGTGGAAGGGTTTCTGAGGAATGCTAAGGTTTTATTGAAGAAATTAGA
F-493 Melon phloem library F Cucumis melo cDNA clone PH6B1, mRNA sequence.
EB714822.1:455-474
AGTTTCTGCCAAATTCAATTGAACAAGGAA455TTGGTGGAAGGGTTTCTGAGGAACGCTAAGGTTTTATTGAAGAAATTAGA
EST11013010 CM-TEa library Cucumis melo cDNA clone TEa0010K18, mRNA sequence.
JG471297.1:539-558
AGTTTCTGCCAAATTCAATTGAACAAGGAA539TTGGTGGAAGGGTTTCTGAGGAACGCTAAGGTTTTATTGAAGAAATTAGA
EST11035577 MNRP2 library Cucumis melo cDNA clone CA13YI06FM1, mRNA sequence.
JG493864.1:206-225
AGTTTCTGCCAAATTCAATTGAACAAGGAA206TTGGTGGAAGGGTTTCTGAGGAACGCTAAGGTTTTATTGAAGAAATTAGA
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_780, mRNA sequence.
JW918949.1:585-604
AGTTTCTGCCAAATTCAATTGAACAAGGAA585TTGGTGGAAGGGTTTCTGAGGAACGCTAGGGTTTTATTGAAGAAATTAGA
1095460227931 Global-Ocean-Sampling_GS-31-01-01-1P3-1P8KB marine metagenome genomic clone 1061005674065 3', genomic survey sequence.
EK241667.1:335-354
GCGTAGATTTTTATCAAAGAAATATTGAGC335TTGGTGGAAGGGTTTCTGAGTGGTGGCAACCCATGTCGTTTGCCGTCGTT
1092402601173 Global-Ocean-Sampling_GS-34-01-01-1P5-1P8KB marine metagenome genomic clone 1061001558425 5', genomic survey sequence.
ER360818.1:616-635
GCGTAGATTTTTATCAAAGAAATATTGAGC616TTGGTGGAAGGGTTTCTGAGTGGTGGCAACCCATGTCGTTTGCCGTCGTT
Crataegus laevigata genome assembly, chromosome: 12.
OY756949.1:25129412-25129431
CTTTTGAAGGATTTAATATGATATATTTTC25129412TTGGTGGAAGGGTTTCTGAGGTAGGATGCCGATAAGGGAATGATACGGAA
Schoenobius gigantella genome assembly, chromosome: 12.
OZ012552.1:1846836-1846855
TGAGTACAGATCTTTCTCTGCTTGGTTTGA1846836TTGGTGGAAGGGTTTCTGAGCTAGGCTAGCTACCGCCGTCTTACCTAAGT
Arbacia lixula genome assembly, chromosome: 17.
OZ022592.1:13512113-13512132
TCGGGAAGGAGGGGAGTGGGAGAGATGGGT13512113TTGGTGGAAGGGTTTCTGAGATTGGTCTAACTTTAAGTGGGGGGGTGAGG
Panstrongylus geniculatus genome assembly, chromosome: 8.
OZ076913.1:82557206-82557225
TTTTAGTTTATCGCGATTTACAACTGATTT82557206TTGGTGGAAGGGTTTCTGAGGAAACAGTTGCGTTTTACCTTCCTTTAAAG
Kyklioacalles roboris genome assembly, chromosome: 13.
OZ125633.1:4244161-4244180
GAACCGGCTTGATCTGGTAGGAGAATCTCT4244161TTGGTGGAAGGGTTTCTGAGCAGTGGCTTCCTTTGGGGTAGGTCTCTCAC
Dolichomitus mesocentrus genome assembly, chromosome: 3.
OZ187110.1:64824235-64824254
CCCGAGGGATAAAAGGGACATTCCCGCGGG64824235TTGGTGGAAGGGTTTCTGAGGGGTAGAGGATGGATTCCCGAGGAATAGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCAGAAACCCTTCCACCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCAGAAACCCTTCCACCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.803 | 0.794 | search_plus_done; http://172.18.8.135:50800/match?q=CTCAGAAACCCTTCCACCAA&k=0&no_gap=0&offset=0&limit=50
1.820 | 1.016 | search_minus_done; http://172.18.8.135:50800/match?q=TTGGTGGAAGGGTTTCTGAG&k=0&no_gap=0&offset=0&limit=10
1.829 | 0.009 | cgi_end;

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