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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 19:28:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus vulgaris genome assembly, chromosome: X.
LR738621.1:63354291-63354308
CAAGCTGCCTCTTGGAAGAAGTGAGTAGCC63354291CTCAGGAGACATCAAAACTGCTGGTGCCTTGAACCTGTCTTCACAGAC
Onychomys torridus genome assembly, chromosome: 15.
LR877202.1:64600016-64600033
TATAGGTCAGTTATGTTGCCTCCCTCTCTT64600016CTCAGGAGACATCAAAACCACAATTCTGGAAAGGAAAGCTGGTCACAG
Heterocephalus glaber genome assembly, chromosome: 18.
OX090926.1:22248320-22248337
TTCTTATAGGTTCTGCAGGATTTCACAACC22248320CTCAGGAGACATCAAAACATTACTGTGCATTTGAGTAGACTGATCCTG
Heterocephalus glaber genome assembly, chromosome: 18.
OX090958.1:32416927-32416944
TTCTTATAGGTTCTGCAGGATTTCACAACC32416927CTCAGGAGACATCAAAACATTACTGTGCATTTGAGTAGACTGATCCTG
Onychomys arenicola genome assembly, chromosome: 15.
OX460361.1:64347362-64347379
TATAGGTCAGTTATGTTGCCTCCCTCTCTT64347362CTCAGGAGACATCAAAACCACAATTCTGGAAAGGAAAGCTGGTCACAG
Onychomys leucogaster genome assembly, chromosome: 15.
OX460385.1:64664131-64664148
TATAGGTCAGTTATGTTGCCTCCCTCTCTT64664131CTCAGGAGACATCAAAACCACAATTCTGGAAAGGAAAGCTGGTCACAG
Onychomys leucogaster genome assembly, chromosome: 15.
OX460432.1:64963556-64963573
TATAGGTCAGTTATGTTGCCTCCCTCTCTT64963556CTCAGGAGACATCAAAACCACAATTCTGGAAAGGAAAGCTGGTCACAG
Onychomys arenicola genome assembly, chromosome: 15.
OX460456.1:66799292-66799309
TATAGGTCAGTTATGTTGCCTCCCTCTCTT66799292CTCAGGAGACATCAAAACCACAATTCTGGAAAGGAAAGCTGGTCACAG
Onychomys torridus genome assembly, chromosome: 15.
OX460896.1:64600016-64600033
TATAGGTCAGTTATGTTGCCTCCCTCTCTT64600016CTCAGGAGACATCAAAACCACAATTCTGGAAAGGAAAGCTGGTCACAG
Micromys minutus genome assembly, chromosome: 20.
OZ004800.1:41165556-41165573
TATAGGCCAGCCATGTTTTCTTCCTCTCCT41165556CTCAGGAGACATCAAAACTAGAATTTAGGGAAGTAAAGCAGCTCACAG
Geotrypetes seraphini genome assembly, chromosome: 19.
LR699164.1:29643843-29643860
TTATAGAACCATGCCTAGCAGTACTTAAGT29643843CTCAGGAGACATCAAAACCTTAGATGCCTCTTATTTATGCTAGGGTTT
Acipenser ruthenus genome assembly, chromosome: 7.
OV737688.1:63859784-63859801
CAAATACTACCTGTCAGAGCAACAGTGGCA63859784CTCAGGAGACATCAAAACACAGATACACAGAGTAAAACGCAGTCACTC
Acipenser ruthenus genome assembly, chromosome: 7.
OV754676.1:66779144-66779161
CAAATACTACCTGTCAGAGCAACAGTGGCA66779144CTCAGGAGACATCAAAACACAGATACACAGAGTAAAACGCAGTCACTC
WS01915.B21_F19 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01915_F19 3', mRNA sequence.
CV230078.1:606-623
AGCGGCGGAGATGAGTTCGCCGACGGTGGA606CTCAGGAGACATCAAAACTTGTACTGCACCAACGCTGCCTTGAACCGT
WS0197.B21_F05 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0197_F05 3', mRNA sequence.
CV232352.1:605-622
AGCGGCGGAGATGAGTTCGCCGACGGTGGA605CTCAGGAGACATCAAAACTTGTACTGCACCAACGCTGCCTTGAACCGT
WS02515.B21_I14 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02515_I14 3', mRNA sequence.
CV242609.1:660-677
AGCGGCGGAGATGAGTTCGCCGACGGTGGA660CTCAGGAGACATCAAAACTTGTACTGCACCAACGCTGCCTTGAACCGT
WS02411.B21_A09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus deltoides cDNA clone WS02411_A09 3', mRNA sequence.
CV254729.1:691-708
AGCGGCGGAGATGAGTTCGCCGACGGTGGA691CTCAGGAGACATCAAAACTTGTACTGCACCAACGCTGCCTTGAACCGT
WS0244.B21_E11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus deltoides cDNA clone WS0244_E11 3', mRNA sequence.
CV256590.1:638-655
AGCGGCGGAAATGAGTTCGCCGACGGGGGA638CTCAGGAGACATCAAAACTTGTACTGCACCAACGCTGCCTTGAACCGT
WS0201.B21_J20 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra cDNA clone WS0201_J20 3', mRNA sequence.
CV258824.1:602-619
AGCGGCGGAGATGAGTTCGCCGACGGTGGA602CTCAGGAGACATCAAAACTTGTACTGCC
WS02025.B21_G02 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra cDNA clone WS02025_G02 3', mRNA sequence.
CV264749.1:693-710
AGCGGCGGAGATGAGTTCGCCGACGGTGGA693CTCAGGAGACATCAAAACTTGTACTGCACCAACGCTGCCTTGAACCGT
WS02435.B21_E11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus deltoides cDNA clone WS02435_E11 3', mRNA sequence.
DT517777.1:732-749
AGCGGCGGAGATGAGTTCGCCGACGGTGGA732CTCAGGAGACATCAAAACTTGTACTGCACCAACGCTGCCTTGAACCGT
TSA: Larix kaempferi PEMC19498.Lakaproemb mRNA sequence.
JR149694.1:230-247
GCCAAACAAAGATGTCTGGGATTGTTTTAC230CTCAGGAGACATCAAAACATTCTCTGCTGTATTCCTGCAAGCATATTG
Homo sapiens chromosome 3 clone RP11-359D11, WORKING DRAFT SEQUENCE, 56 unordered pieces.
AC048333.17:79991-80008
AGTATTAGGAAAACCTTGGCAAAAATTCCT79991CTCAGGAGACATCAAAACAATTGTCTTAACCAGAGTTTTAAAATTTAA
Quercus variabilis isolate HB chromosome 2b.
CP129434.1:33816886-33816903
CAATCTCAGGGATTTCTTAATTGTAATTCT33816886CTCAGGAGACATCAAAACTAGCCCCACTCCAGATCCTCTGTGGTTCAT
Quercus variabilis isolate HB chromosome 2a.
CP129446.1:34048079-34048096
CAATCTCAGGGATTTCTTAATTGTAATTCT34048079CTCAGGAGACATCAAAACTAGCCCCACTCCAGATCCTCTGTGGTTCAT
Triticum turgidum subsp. durum genome assembly, chromosome: 6B.
LT934122.1:6554436-6554453
ATTCAACTGTATGTTACAATGTGGCAAAGA6554436CTCAGGAGACATCAAAACTGCCTTCTTGGCATAGGGGAGGGGGCAGGG
Polytrichum commune genome assembly, chromosome: 7.
OX485809.1:22965582-22965599
CATCATATATATATGTCTCTGTACAACACA22965582CTCAGGAGACATCAAAACTGTATGATGAGGTATGATTTGGTTTCAGAC
Populus nigra genome assembly, chromosome: 7.
OX637678.1:3797213-3797230
AGCGGCGGAGATGAGTTCGCCGACGGTGGA3797213CTCAGGAGACATCAAAACTTGTACTGCACCAACGCTGCCTTGAACCGT
Antheraea yamamai NBRP DNA, chromosome 25, sequence.
AP028448.1:1465257-1465274
TTAAAAATCGGGACGTCGGGCAACGCTGGT1465257CTCAGGAGACATCAAAACAATTTACATTAGGATTCCAATTAGAAAGTG
Notodromas monacha.
OA888599.1:264-281
GATTAAATTCATTACGTCCATGTATGGAAG264CTCAGGAGACATCAAAACTTGGCCAGGAGATAAAAAGAAAAAATGTTC
Nezara viridula genome assembly, chromosome: 1.
OV725077.1:53720880-53720897
ACACCATTTTTCGGGATTTGGTTATATGGA53720880CTCAGGAGACATCAAAACATTTATTTCAATTGCAAAACTTGGATTAGA
Nezara viridula genome assembly, chromosome: 1.
OV725077.1:77177050-77177067
ATACCATTTTGGGGGATTTGGTTATTTGGA77177050CTCAGGAGACATCAAAACATGTATTTTTGTTGAAAACTCAGATTCGAA
Nezara viridula genome assembly, chromosome: 1.
OV725077.1:144400491-144400508
AGACCATTTTGTAGGACTTGGTTATTTGGA144400491CTCAGGAGACATCAAAACATGTATTTCCGTTGAAAACTCAGATTCAAA
Nezara viridula genome assembly, chromosome: 1.
OV725077.1:236329434-236329451
AGACCATTTTCCGACACTTGGTTATTTGGA236329434CTCAGGAGACATCAAAACATGTATTTCCGTTGAAAACTGAGATTCGAA
Nezara viridula genome assembly, chromosome: 2.
OV725078.1:85259224-85259241
ACACCATTTTGCGGGACTTGGTTATTTGTA85259224CTCAGGAGACATCAAAACATGTATTTCAGCTGAAAACACAGATCCAAA
Nezara viridula genome assembly, chromosome: 2.
OV725078.1:106222434-106222451
AGACCATTTTGCGGGACTTGGTTATTTGTA106222434CTCAGGAGACATCAAAACCTGTATTTCCGTTGAAAACTCAGACTCGAA
Nezara viridula genome assembly, chromosome: 2.
OV725078.1:158976307-158976324
AGATCATTTTGCGGGACTTGGTTATTTGGA158976307CTCAGGAGACATCAAAACATGTGTTTCTGTTGAAAACTGAGATTTGAA
Nezara viridula genome assembly, chromosome: 3.
OV725079.1:106221-106238
AGACCATTTTGTGGGACATGGTTATATGGA106221CTCAGGAGACATCAAAACGTGTATTTCTGTTGGATACACAGATTAAAA
Nezara viridula genome assembly, chromosome: 3.
OV725079.1:80462733-80462750
AGAATATTTTGCGGGACTTAGTTATTTGGA80462733CTCAGGAGACATCAAAACATTTCCGTTGAAAACTTGCGAAAACTGAAC
Nezara viridula genome assembly, chromosome: 3.
OV725079.1:100662507-100662524
AAACCATTTTGCAGAACTTGGTTATTTGGA100662507CTCAGGAGACATCAAAACACATATTTCTGATGAAAACTCTGATTCCAA
Nezara viridula genome assembly, chromosome: 3.
OV725079.1:112996059-112996076
AACACACAGAGACCATTTTGGTTATTTGGA112996059CTCAGGAGACATCAAAACATATATTTCCATTGAAAACTAAGATTAAAA
Nezara viridula genome assembly, chromosome: 3.
OV725079.1:126047429-126047446
AGACCATTTTTCGGGACTTGGTTATTTGGA126047429CTCAGGAGACATCAAAACATGTTTTTCCGTTGAAAACTCAGATTCTAA
Nezara viridula genome assembly, chromosome: 3.
OV725079.1:168692170-168692187
AGACCATTTTACGGGACGTGGTTATTTGGA168692170CTCAGGAGACATCAAAACATGTATTTGCGTTGAAAACTTAGATTCGAA
Nezara viridula genome assembly, chromosome: 4.
OV725080.1:185541-185558
AGACCATTTTGCAGGACTTGGTTATTTGGA185541CTCAGGAGACATCAAAACGTGTGTTTTCATTGAAAATTCAATTAAAAA
Nezara viridula genome assembly, chromosome: 4.
OV725080.1:17677875-17677892
CAAACCATTTTCAGGACTTGGTTATTTGGA17677875CTCAGGAGACATCAAAACAAGTATGTGAAAACTCGAAAATTTTCATGA
Nezara viridula genome assembly, chromosome: 4.
OV725080.1:148979925-148979942
ACACACGCACGCACGCACGCACCATTTGGA148979925CTCAGGAGACATCAAAACATGCATTTCCTTTGAAAACAAAGATTCGAA
Nezara viridula genome assembly, chromosome: 6.
OV725082.1:56788886-56788903
TGTCCATTTTGCGAGACTTGGTTATTTAGG56788886CTCAGGAGACATCAAAACGTGTATTTCCGTTGAAATCTAAGATAAGCA
Nezara viridula genome assembly, chromosome: 7.
OV725083.1:46938252-46938269
TATTTAATTTAATTAACTTGGTTATTTGGA46938252CTCAGGAGACATCAAAACGTGTATGTCCGTTGAAAATTCAGATTATCA
Nezara viridula genome assembly, chromosome: 7.
OV725083.1:47765325-47765342
AGACCATTTTGTGGTACTTGGTTATTTGGA47765325CTCAGGAGACATCAAAACGTGTATTTCCGTTGAAAACTCAGATTCGAA
Cryptocephalus moraei genome assembly, chromosome: 8.
OX276460.1:8166762-8166779
AGACATTTTTTCAAAATAATGTTTTTTGGA8166762CTCAGGAGACATCAAAACGTCTAGAAATGCTAGTAACTCGAATTCAAA
Gerris lacustris genome assembly, chromosome: 2.
OX578277.1:54192375-54192392
CAGAAATTTTTAAAAAACCACTTTTTTGGT54192375CTCAGGAGACATCAAAACGTGTCAAAAATCGAATTATCGCGCCATTAC
Gerris lacustris genome assembly, chromosome: 3.
OX578278.1:55488080-55488097
CAGACATTTTTTAAAAATAACTTTTTTGGA55488080CTCAGGAGACATCAAAACGTGTAAATTCATCAAAATCGAATTTTCAAG
Gerris lacustris genome assembly, chromosome: 4.
OX578279.1:52018568-52018585
CTGCACAGAGGACAGACAAACATTTTTGGA52018568CTCAGGAGACATCAAAACATGTAAATCCATCAAAACCTCAAAATCGAA
Gerris lacustris genome assembly, chromosome: 5.
OX578280.1:2582287-2582304
CAGACATTTTTTAAAAACCACTTTTTTGGA2582287CTCAGGAGACATCAAAACGTGTAAATACATCAAAATCTCAAAATCGAA
Gerris lacustris genome assembly, chromosome: 9.
OX578284.1:8395003-8395020
CAGAACTTTTTGAAAAACCACTTATTTGGA8395003CTCAGGAGACATCAAAACGTGTAATTCTATCAAAATCTTGAAAATCAA
Tipula vernalis genome assembly, chromosome: 1.
OY282558.1:270357751-270357768
AGACACCATTTCGAAACCAACCTTTTCGAA270357751CTCAGGAGACATCAAAACAGATAAATCTCTAAAAATCTACCATATTTT
Tipula vernalis genome assembly, chromosome: 2.
OY282559.1:406572932-406572949
AGACACCATTTCGAAACCCACTTTTTCGGA406572932CTCAGGAGACATCAAAACAAATAAATCTCTAAAAATCTCAAGGTCCAA
Geotrupes spiniger genome assembly, chromosome: 3.
OY390733.1:46224974-46224991
AATAGGTTTGGCAGTAGAGCACAGAGTCAA46224974CTCAGGAGACATCAAAACGTGTATTTTGTTCAGTTAAAATCTCAAGCT
Aphrophora alni genome assembly, chromosome: 3.
OY740768.1:44522080-44522097
CAAATTCCAAAAAGAATAACTTTTTATTTA44522080CTCAGGAGACATCAAAACTGAGATTGCCATGAAAAACCCAACGCTAAT
Aphrophora alni genome assembly, chromosome: 6.
OY740771.1:27524802-27524819
ATGCCATCATTCCAAAAACCACTTTCTTAA27524802CTCAGGAGACATCAAAACAGATTTATTTTATTGACCCATCACCTACAT
Sepiola atlantica genome assembly, chromosome: 16.
OY744530.1:110322929-110322946
TTGCCATTGATAATAGTGACAGTAATCCGG110322929CTCAGGAGACATCAAAACACGTTACGTAATGTTACAGGTTCAACGATC
Sturmia bella genome assembly, chromosome: 1.
OY759168.1:24620397-24620414
GTAAATACACACGCTACAAACAATAACAGG24620397CTCAGGAGACATCAAAACTGACAGAAATTTAAGGGCCAAAGGGTGCCC
Helleia helle genome assembly, chromosome: 15.
OY971429.1:4042776-4042793
CGACCCTGGTCTAAAACTAGCACTTAGCAC4042776CTCAGGAGACATCAAAACCTTTAGGTAACAAAGTTTGTTAAGTTTAAC
Salticus scenicus genome assembly, chromosome: 1.
OZ005648.1:29584483-29584500
GACATACATGCGTACATTAGCAAATATAAA29584483CTCAGGAGACATCAAAACGTACAAATACATCAAAATCTTATAGTCGAG
Salticus scenicus genome assembly, chromosome: 3.
OZ005650.1:271678715-271678732
TATACATCGCCGTAAAAATAGTAAAAGGAC271678715CTCAGGAGACATCAAAACGTATAGAAACACCGAAACCTAGAAGTACAA
Salticus scenicus genome assembly, chromosome: 5.
OZ005652.1:276015160-276015177
ATACATCATCGTAAAAACAGTGAAAACGAA276015160CTCAGGAGACATCAAAACGTGTAGAAACACTAAAATCTCGAATTTGGA
Salticus scenicus genome assembly, chromosome: 8.
OZ005655.1:226545444-226545461
ATACATCATCGTAAAAATAGTGAAAACGGA226545444CTCAGGAGACATCAAAACGTATAGAAACATCAAAATCTCAAATTCGGA
Salticus scenicus genome assembly, chromosome: 11.
OZ005658.1:82152298-82152315
ATACATCACCGTAAAAATAGGACAAATGAA82152298CTCAGGAGACATCAAAACGTATAGAAACAACAAAATCTTAATATCGAA
Salticus scenicus genome assembly, chromosome: 11.
OZ005658.1:269099126-269099143
CTACATCATCGTAAAAATAGTGAAAACGGA269099126CTCAGGAGACATCAAAACGTATAGAAACACCAAAATCTCGAATTCGGA
Salticus scenicus genome assembly, chromosome: 12.
OZ005659.1:182399895-182399912
CACACATACATACATCACCGTAAAAATGAA182399895CTCAGGAGACATCAAAACATATAGATAGGCCAAAATCTCAGAGCCAAA
Salticus scenicus genome assembly, chromosome: 13.
OZ005660.1:110337323-110337340
CCATTATGTGCCAAAAATGGCTAAAATGAA110337323CTCAGGAGACATCAAAACGTTTATTACACCCACAATACTTTCCTTACA
Salticus scenicus genome assembly, chromosome: 13.
OZ005660.1:110384280-110384297
CCATTATGTGCCAAAAATGGCTAAAATGAA110384280CTCAGGAGACATCAAAACGTTTATTACACCCACAATACTTTCCTTACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCAGGAGACATCAAAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCAGGAGACATCAAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.476 | 0.467 | search_plus_done; http://172.18.8.135:50400/match?q=CTCAGGAGACATCAAAAC&k=0&no_gap=0&offset=0&limit=50
0.553 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTTGATGTCTCCTGAG&k=0&no_gap=0&offset=0&limit=0
0.553 | 0.000 | cgi_end;

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