GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 12:06:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Galeopsis tetrahit genome assembly, chromosome: 6.
OY776124.1:74336624-74336643
GTGTTCATCCATTGAACAGAAGCCAAGAGT74336624CTCATCCATGCTCTAACTAAATCTCGTCTGCGCTGGCATATATATTTGGG
Galeopsis tetrahit genome assembly, chromosome: 10.
OY776128.1:68750965-68750984
GTGTTCATCCATTGAACAGAAGCCAAGAGT68750965CTCATCCATGCTCTAACTAAATCTCGTCTGCGCTGGCATATATATTTGGG
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:1065385512-1065385531
AGCACATTATCTGAAACCCCTTTGCGACGA1065385512TTAGTTAGAGCATGGATGAGAGTAATAGATTTGGTAGGTGGAGATGGAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCATCCATGCTCTAACTAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCATCCATGCTCTAACTAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=CTCATCCATGCTCTAACTAA&k=0&no_gap=0&offset=0&limit=50
0.108 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=TTAGTTAGAGCATGGATGAG&k=0&no_gap=0&offset=0&limit=48
0.108 | 0.001 | cgi_end;

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