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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:23:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Erinaceus europaeus genome assembly, chromosome: 3.
OX485812.1:177656996-177657015
CAGTCCACTCTGCCACCCCCATCCCTGCTT177656996CTCCCACTCCTCCATTCAACTCCTCCATCTCCCCAATTCCTCCATCTCCC
Triticum aestivum genome assembly, chromosome: 3B.
LR862515.1:805527149-805527168
GGATATGGTCCAGCTTATTTGAATCCTCAA805527149CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR862536.1:792070070-792070089
GGATATGGTCCAGCTTATTTGAATCCTCAA792070070CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR862536.1:792087254-792087273
GGATATGGTCCAGCTTATTTGAATCCTCAA792087254CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR862557.1:839997943-839997962
GGATATGGTCCAGCTTATTTGAATCCTCAA839997943CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR865465.1:802029278-802029297
GGATATGGTCCAGCTTATTTGAATCCTCAA802029278CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR865486.1:785667302-785667321
GGATATGGTCCAGCTTATTTGAATCCTCAA785667302CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR865507.1:808703091-808703110
GGATATGGTCCAGCTTATTTGAATCCTCAA808703091CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR865746.1:807650760-807650779
GGATATGGTCCAGCTTATTTGAATCCTCAA807650760CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR865767.1:787787817-787787836
GGATATGGTCCAGCTTATTTGAATCCTCAA787787817CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LR878442.1:802117523-802117542
GGATATGGTCCAGCTTATTTGAATCCTCAA802117523CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
LS992087.1:783050276-783050295
GGATATGGTCCAGCTTATTTGAATCCTCAA783050276CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:791871969-791871988
GGATATGGTCCAGCTTATTTGAATCCTCAA791871969CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OU015728.1:803931250-803931269
GGATATGGTCCAGCTTATTTGAATCCTCAA803931250CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OU015728.1:803948723-803948742
GGATATGGTCCAGCTTATTTGAATCCTCAA803948723CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OU343178.1:811125997-811126016
GGATATGGTCCAGCTTATTTGAATCCTCAA811125997CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OU963879.1:800571469-800571488
GGATATGGTCCAGCTTATTTGAATCCTCAA800571469CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OV100744.1:804353121-804353140
GGATATGGTCCAGCTTATTTGAATCCTCAA804353121CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OV100744.1:804370594-804370613
GGATATGGTCCAGCTTATTTGAATCCTCAA804370594CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OW530317.1:804353121-804353140
GGATATGGTCCAGCTTATTTGAATCCTCAA804353121CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OW530317.1:804370594-804370613
GGATATGGTCCAGCTTATTTGAATCCTCAA804370594CTCCCACTCCTCCATTCAACATGGTGCTGCTCGAAAAAAATACCGATGAA
Triticum aestivum genome assembly, chromosome: 3B.
OX637232.1:700100306-700100325
GGATATGGTCCAGCTTATTTGAATCCTCAA700100306CTCCCACTCCTCCATTCAACATGGTGCTCCTCGAAAAAAATACCGATGAA
Sarcophaga subvicina genome assembly, chromosome: 3.
OW388082.2:3277107-3277126
AAATACCTCTTTATTGGCCCTCTCTTTACT3277107CTCCCACTCCTCCATTCAACGTGATCTGATTTTTAGATTTGCAAGATAGC
Erinaceus europaeus genome assembly, chromosome: 2.
OX485811.1:21334376-21334395
TCCCTTCTCAAAGTAACAAGGTCGTCATCA21334376GTTGAATGGAGGAGTGGGAGCAGCACAATCTCAGGGGCAGAGGCCGTGTC
Gymnoscopelus microlampas genome assembly, chromosome: 20.
OY732722.1:11879370-11879389
GCAGAACTCCCTAGGAAGGGGAGATTACAA11879370GTTGAATGGAGGAGTGGGAGTTAATTAAACTCCTGAGAGTGTGCAATTGT
Echiichthys vipera genome assembly, chromosome: 15.
OY829660.1:16204464-16204483
AAATACAAATGTTAATAATGATATTACAAA16204464GTTGAATGGAGGAGTGGGAGAGAGTCCCCTGGGTGGAATGTTCACTTGAA
N6 Not1 Targeted Wheat BAC Library Triticum aestivum genomic clone N6, genomic survey sequence.
BH758980.1:85-104
TTCATCGGTATTTTTTTCGAGGAGCACCAT85GTTGAATGGAGGAGTGGGAGTTGAGG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB084K02, complete sequence.
AC189489.2:6537-6556
TTTGAACACTATATATTTTTTTTTTTAAAA6537GTTGAATGGAGGAGTGGGAGATCTGTGGTTGTTTTTGAAGCAAATAAGTT
Triticum aestivum genome assembly, chromosome: 3B.
LR877316.1:797956569-797956588
TTCATCGGTATTTTTTTCGAGGAGCACCAT797956569GTTGAATGGAGGAGTGGGAGTTGAGGATTCAAATAAGCTGGACCATATCC
Sthenelais limicola genome assembly, chromosome: 8.
OW804101.1:64145239-64145258
AGGGGCCAGATAGGGTGAGGGGAGAAAGGG64145239GTTGAATGGAGGAGTGGGAGGAGATCGAGGGTATGTTAGTGGGTGAGTGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCCACTCCTCCATTCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCCACTCCTCCATTCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.207 | 0.198 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCCACTCCTCCATTCAAC&k=0&no_gap=0&offset=0&limit=50
0.347 | 0.140 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGAATGGAGGAGTGGGAG&k=0&no_gap=0&offset=0&limit=27
0.352 | 0.005 | cgi_end;

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