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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-16 13:15:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Balaenoptera acutorostrata genome assembly, chromosome: 12.
OX465362.1:67608193-67608212
TTTGTCTTGAGGCAGATCCCAATACTAAAT67608193CTCCCATAAAATTTGGCACAAGGTTCAGTCTACAAACAATCACAAAATAG
Strongylocentrotus purpuratus clone R3-3005I11, WORKING DRAFT SEQUENCE, 12 unordered pieces.
AC176249.1:55334-55353
CTAAAAAAATGAACATTCAATGTGATATTT55334CTCCCATAAAATTTGGCACATCAGAGCAAACCATTGATACAATGTTTCAA
Strongylocentrotus purpuratus clone R3-1034F08, WORKING DRAFT SEQUENCE, 29 unordered pieces.
AC181776.1:197790-197809
CTAAAAAAATGAACATTCAATGTGATATTT197790CTCCCATAAAATTTGGCACATCAGAGCAAACCATTGATACAATGTTTCAA
MC224 Melon Lambda Zap Express Library Cucumis melo cDNA clone MC224 5', mRNA sequence.
CF674925.1:509-528
TATATTATGCTTTCGAAAATAATATTCATA509TGTGCCAAATTTTATGGGAGA
Strongylocentrotus purpuratus clone R3-12N4, WORKING DRAFT SEQUENCE, 50 unordered pieces.
AC178723.1:103619-103638
TTGAAACATTGTATCAATGGTTTGCTCTGA103619TGTGCCAAATTTTATGGGAGAAATATCACATTGAATGTTCATTTTTTTAG
Strongylocentrotus purpuratus clone R3-12H13, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC201018.1:33113-33132
TTGAAACATTGTATCAATGGTTTGCTCTGA33113TGTGCCAAATTTTATGGGAGAAATATCACATTGAATGTTCATTTTTTTAG
Thecocarcelia acutangulata genome assembly, chromosome: X.
OU612099.1:3176864-3176883
TATTTTTTCTTTTTAATAAAGACTTATCAA3176864TGTGCCAAATTTTATGGGAGTCGGCTCATTCGTTTGACCGTGAAGGCAGT
Scrobipalpa costella genome assembly, chromosome: Z.
OX463295.1:25895677-25895696
AAGGTCCCGATAGCTATGTTATCACATCTA25895677TGTGCCAAATTTTATGGGAGTTTCACAGACAGATACGATATATTAGTTAC
Chorisops tibialis genome assembly, chromosome: 2.
OY770263.1:281928805-281928824
AAAAATCGACTTTTTGAAAAGTTTTTGAAT281928805TGTGCCAAATTTTATGGGAGGGGGTAGAAGGAGTGAAGCTAATCGCCTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCCATAAAATTTGGCACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCCATAAAATTTGGCACA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.389 | 0.380 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCCATAAAATTTGGCACA&k=0&no_gap=0&offset=0&limit=50
0.547 | 0.158 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGCCAAATTTTATGGGAG&k=0&no_gap=0&offset=0&limit=47
0.551 | 0.004 | cgi_end;

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