GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 06:15:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus cDNA clone:MWM113g04_r, 5' end.
AV415574.1:79-98
CCTCCCTTCCTCCAAAACTCATGGAATCCT79CTCCCATTGAACGCCTTGACTTTGGGAAGATGGGATATGGGTGCAAGCAT
Lotus japonicus cDNA clone:MWM177d09_r, 5' end.
AV420101.1:92-111
CCTCCCTTCCTCCAAAACTCATGGAATCCT92CTCCCATTGAACGCCTTGACTTTGGGAAGATGGGATATGGGTGCAAGCAT
Lotus japonicus cDNA clone:MWM078f12_r, 5' end.
AV427258.1:109-128
CCTCCCTTCCTCCAAAACTCATGGAATCCT109CTCCCATTGAACGCCTTGACTTTGGGAAGATGGGATATGGGTGCAAGCAT
Lotus japonicus mRNA, clone: MR031d12_r, 5' end sequence.
DC599121.1:96-115
CCTCCCTTCCTCCAAAACTCATGGAATCCT96CTCCCATTGAACGCCTTGACTTTGGGAAGATGGGATATGGGTGCAAGCAT
Lotus japonicus genomic DNA, chromosome 6, clone: LjT15B19, TM0756.
AP010076.1:9318-9337
AAACACACACCCATATCCCATCTTCCCAAA9318GTCAAGGCGTTCAATGGGAGAGGATTCCATGAGTTTTGGAGGAAGGGAGG
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:62366705-62366724
AAACACACACCCATATCCCATCTTCCCAAA62366705GTCAAGGCGTTCAATGGGAGAGGATTCCATGAGTTTTGGAGGAAGGGAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCCCATTGAACGCCTTGAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCCATTGAACGCCTTGAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.153 | 0.145 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCCATTGAACGCCTTGAC&k=0&no_gap=0&offset=0&limit=50
0.170 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GTCAAGGCGTTCAATGGGAG&k=0&no_gap=0&offset=0&limit=46
0.171 | 0.001 | cgi_end;

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