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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:04:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Peromyscus eremicus genome assembly, chromosome: 8a.
OX460401.1:65413843-65413862
TCCCTGTGGCAGCCATGGTTTAGTGGAGTG65413843CTCCCCTCTTCTCTCTGCAAACATCTTCTGAATGCCCACTGTTTACTAGT
Peromyscus eremicus genome assembly, chromosome: 8a.
OX460473.1:64455199-64455218
TCCCTGTGGCAGCCATGGTTTAGTGGAGTG64455199CTCCCCTCTTCTCTCTGCAAACATCTTCTGAATGCCCACTGTTTACTAGT
Martes martes genome assembly, chromosome: 12.
OY734075.1:94057799-94057818
AGAGTGGTTGTCAAGGCAACGGCACTAACT94057799CTCCCCTCTTCTCTCTGCAAATTTCTTAGCAAATGGGGCTGCTCCCACGC
Vespertilio murinus genome assembly, chromosome: 4.
OZ004707.1:144434440-144434459
CTTGCTCCTCCACCCTGCTTCCCGACTGTT144434440CTCCCCTCTTCTCTCTGCAAAATGCACCCTGACTTTCCTGTTACCTGACC
Muntiacus reevesi genome assembly, chromosome: 2.
OZ005625.1:49377026-49377045
GAATCACAGGTGATGGAGCCCTCCTTCTAT49377026CTCCCCTCTTCTCTCTGCAATGATATCAAGAGGCTAAAAGCCTCAAACCT
Sciaenops ocellatus chromosome 1.
CP136866.1:8795528-8795547
TGTCCTTCCTATCCATCCACCCCCACCCGC8795528CTCCCCTCTTCTCTCTGCAACACTCTGCACTGAGCTCACCCAGAGACGTT
Zebrafish DNA sequence from clone CH211-140C16 in linkage group 1.
CR407571.9:67265-67284
TGAATTATTGCTTATTAAAAGAACTAATTA67265CTCCCCTCTTCTCTCTGCAACATTTATTGGACAGAGGTGCAATTTAGGTT
Cyprinus carpio genome assembly, scaffold: 000000244.
LN592866.1:353072-353091
TGAATTATTGCTTATTAAAATAACTAATTA353072CTCCCCTCTTCTCTCTGCAACATTTTTTGGACAGAGGTGCAATTTAGATT
Nibea albiflora genome assembly, chromosome: 9.
LR699032.1:5827349-5827368
TGTCCTTCCTATCCATCCACCCCCACCCGC5827349CTCCCCTCTTCTCTCTGCAACACTCTGCACTGAGCTCACCCAGAGACGTT
Danio aesculapii genome assembly, chromosome: 1.
LR812505.1:20162827-20162846
TGAATTATTGCTTATTAAAAGAACTAATTA20162827CTCCCCTCTTCTCTCTGCAACATTTATTGGACAGAGGTGCAATTTAGGTT
Barbus barbus genome assembly, chromosome: 7.
OW387174.1:13364491-13364510
TGAATTATTGCTTATTAAAAGAACTAATTA13364491CTCCCCTCTTCTCTCTGCAACATTTATTGGACAGAGGTGCAATTTAGGTT
Argyrosomus regius genome assembly, chromosome: 12.
OX336893.1:25967870-25967889
TGTCCTTCCTATCCATCCACCCCCACCCGC25967870CTCCCCTCTTCTCTCTGCAACACTCTGCACTGAGCTCACCCAGAGACGTT
Platichthys flesus genome assembly, chromosome: 18.
OX438733.1:6759358-6759377
CTCTCTTCCAGTCTGTCTCAGTCTGCCCCC6759358CTCCCCTCTTCTCTCTGCAATATCTGAAAGGCTCTCATACACAAATACAA
Squalius cephalus genome assembly, chromosome: 2.
OX439248.1:26359508-26359527
TGAATTATTGCTTATTAAAAGAACTAATTA26359508CTCCCCTCTTCTCTCTGCAACATTTATTGGACAGAGGTGCAATTTAGGTT
Atr01b_24_C11_C010.g1 FGP Male Amborella trichopoda Amborella trichopoda cDNA clone 122KGn_F22 5', mRNA sequence.
FD426780.1:109-128
CCCTAATTTCACCCTTATAGCCGCGCCCTC109CTCCCCTCTTCTCTCTGCAATTCCCCCTCTCTCTCTCTCTCTCTCTCTGT
Atr01b_50_F03_C010.g1 FGP Male Amborella trichopoda Amborella trichopoda cDNA clone 122KGu_K05 5', mRNA sequence.
FD428075.1:102-121
CCCTAATTTCCCCCTTATAGCCACGCCCTC102CTCCCCTCTTCTCTCTGCAATTCCCCCTCTCTCTCTCTCTCTCTCTCTCT
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-249F2.
CU468403.2:182740-182759
ATTGAGAAGAGAATCAAGTAGGAAAGAAAA182740CTCCCCTCTTCTCTCTGCAAATCCCTCTCCCCTTTCTGTAGATAACCACT
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-262E19.
CU607020.2:116075-116094
ATTGAGAAGAGAATCAAGTAGGAAAGAAAA116075CTCCCCTCTTCTCTCTGCAAATCCCTCTCCCCTTTCTGTAGATAACCACT
Narthecium ossifragum genome assembly, chromosome: 6.
OY986968.1:23391563-23391582
ATCAATAGAAAGATCCACAGCTATGATATC23391563CTCCCCTCTTCTCTCTGCAATCACAGCCCGAGAATCACCGGCATTAGCCA
Bombus campestris genome assembly, chromosome: 15.
HG995140.1:2857856-2857875
CATCTTGTCTCCTCTCTTCCCTCCCTCTCT2857856CTCCCCTCTTCTCTCTGCAACGGACCTACAACCCTCCTCCGTGCACTTTT
Muscardinus avellanarius genome assembly, chromosome: 2.
OY726558.1:51490303-51490322
GGGAGGGATCAGTAGAACTGTGGATGGAGA51490303TTGCAGAGAGAAGAGGGGAGGAAGAAAAGGAGGTTTGATGAAGGAAACAG
Bos mutus isolate yakQH1 chromosome 13.
CP027081.1:46458059-46458078
AGGTTTGAGGCTTTTAGCCTCTTGATATCA46458059TTGCAGAGAGAAGAGGGGAGCTAGAAGGAGGGCTCCATCACCTGTGATTC
Sus scrofa scrofa breed NS chromosome 14.
CP071565.1:37895142-37895161
AGTGGTTATCTACAGAAAGGGGAGAGGGAT37895142TTGCAGAGAGAAGAGGGGAGTTTTCTTTCCTACTTGATTCTCTTCTCAAT
Bos taurus genome assembly, chromosome: 13.
LR962868.1:53506917-53506936
AGGTTTGAGGCTTTTAGCCTCTTGATATCA53506917TTGCAGAGAGAAGAGGGGAGCTAGAAGGAGGGCTCCATCACCTGTGATTC
Bos gaurus x Bos taurus genome assembly, chromosome: 13.
OX258967.1:54139279-54139298
AGGTTTGAGGCTTTTAGCCTCTTGATATCA54139279TTGCAGAGAGAAGAGGGGAGCTAGAAGGAGGGCTCCATCACCTGTGATTC
Bos taurus strain mammals genome assembly, chromosome: 13.
OX344702.1:56888444-56888463
AGGTTTGAGGCTTTTAGCCTCTTGATATCA56888444TTGCAGAGAGAAGAGGGGAGCTAGAAGGAGGGCTCCATCACCTGTGATTC
Sus scrofa genome assembly, chromosome: 14.
OY997221.1:60465608-60465627
AGTGGTTATCTACAGAAAGGGGAGAGGGAT60465608TTGCAGAGAGAAGAGGGGAGTTTTCTTTCCTACTTGATTCTCATCTCAAT
Bos taurus genome assembly, chromosome: Bta13.
OY997241.1:55300195-55300214
AGGTTTGAGGCTTTTAGCCTCTTGATATCA55300195TTGCAGAGAGAAGAGGGGAGCTAGAAGGAGGGCTCCATCACCTGTGATTC
Muntiacus reevesi genome assembly, chromosome: 2.
OZ005625.1:52135725-52135744
AGGTTTGAGGCTTTTAGCCTCTTGATATCA52135725TTGCAGAGAGAAGAGGGGAGATAGAAGGAGGGCTCCATCACCTGTGATTC
Zebrafish DNA sequence from clone CH211-188M17 in linkage group 1.
AL929576.7:31867-31886
AACCTAAATTGCACCTCTGTCCAATAAATG31867TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Danio rerio strain T5D chromosome 1.
CP068735.1:40119112-40119131
AACCTAAATTGCACCTCTGTCCAATAAATG40119112TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Danio rerio strain Tubingen chromosome 1.
CP137022.2:43908481-43908500
AACCTAAATTGCACCTCTGTCCAATAAATG43908481TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Cottoperca gobio genome assembly, chromosome: 10.
LR131917.1:2875724-2875743
AACGTCTCTGGGTGAGCTCAGTGCAGAGTG2875724TTGCAGAGAGAAGAGGGGAGGCGGGTGGGGGTGAACGGATAGGAAGGACA
Sparus aurata genome assembly, chromosome: 2.
LR537122.1:33443177-33443196
CTATTCTAATGTGTGAATGGGACATGGGGT33443177TTGCAGAGAGAAGAGGGGAGGGGGAGAAACTATTGTGTCCTCTGTTGCTT
Danio rerio genome assembly, chromosome: 1.
LR812038.1:41378188-41378207
AACCTAAATTGCACCTCTGTCCAATAAATG41378188TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Danio rerio genome assembly, chromosome: 1.
LR812063.1:40877763-40877782
AACCTAAATTGCACCTCTGTCCAATAAATG40877763TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Danio kyathit genome assembly, chromosome: 1.
LR812519.1:50713145-50713164
AACCTAAATTGCACCTCTGTCCAATAAATG50713145TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Danio rerio strain Cooch Behar (CB) genome assembly, chromosome: 1.
LR812544.1:37292145-37292164
AACCTAAATTGCACCTCTGTCCAATAAATG37292145TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Danio rerio strain Nadia (NA) genome assembly, chromosome: 1.
LR812569.1:41039353-41039372
AACCTAAATTGCACCTCTGTCCAATAAATG41039353TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Danio rerio genome assembly, chromosome: 1.
LR812594.1:39436366-39436385
AACCTAAATTGCACCTCTGTCCAATAAATG39436366TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:482506578-482506597
TAGTGGTCTCCTGGTTGGATTCTACAGCTG482506578TTGCAGAGAGAAGAGGGGAGGGGCTGTGAAGCAGTTCAATAATAATAATG
Danio rerio genome assembly, chromosome: 1.
OX063290.1:42509591-42509610
AACCTAAATTGCACCTCTGTCCAATAAATG42509591TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Phoxinus phoxinus genome assembly, chromosome: 6.
OX424414.1:30054672-30054691
AACCTAAATTGCACCTCTGTCCAATAAATG30054672TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Gobio gobio genome assembly, chromosome: 3.
OX442376.1:43482033-43482052
AACCTAAATTGCACCTCTGTCCAATAAATG43482033TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Rutilus rutilus genome assembly, chromosome: 2.
OX637934.1:34289087-34289106
AACCTAAATTGCACCTCTGTCCAATAAATG34289087TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA
Carassius carassius genome assembly, chromosome: 7.
OY720474.1:27162930-27162949
AACCTAAATTGCACCTCTGTACAATAAATG27162930TTGCAGAGAGAAGAGGGGAGTAATTCGTTCTTTTAATAAGCAATAATTCA
Eutrigla gurnardus genome assembly, chromosome: 5.
OY741268.1:11866267-11866286
AACGTCTCTGGGTGAGCTCAGTGCAGAGTG11866267TTGCAGAGAGAAGAGGGGAGGCGGGTGGGGGTGAAGGGATAGGAAGGACA
1006397 RP42 Bos taurus genomic clone RP42-17I23, genomic survey sequence.
CZ410694.1:309-328
AGGTTTGAGGCTTTTAGCCTCTTGATATCA309TTGCAGAGAGAAGAGGGGAGCTAGAAGGAGGGCTCCATCACCTGTGATTC
Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-152B20.
LO018651.1:121854-121873
AACCTAAATTGCACCTCTGTCCAATAAATG121854TTGCAGAGAGAAGAGGGGAGTAATTAGTTCTTTTAATAAGCAATAATTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCCCTCTTCTCTCTGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCCCTCTTCTCTCTGCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.283 | 0.274 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCCCTCTTCTCTCTGCAA&k=0&no_gap=0&offset=0&limit=50
0.417 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCAGAGAGAAGAGGGGAG&k=0&no_gap=0&offset=0&limit=30
0.436 | 0.019 | cgi_end;

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