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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 05:03:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Heterocephalus glaber genome assembly, chromosome: 9.
OX090917.1:76803250-76803269
CTCTATGAGCTCCATGTCCTTTAATAATGT76803250CTCCCTTTTGCTATGTTTGGTTTTTCTTATTTTCCAATGAAAAATTTCAA
Lotus japonicus cDNA, clone: LjFL3-027-DG04, 5'-end sequence.
FS327422.1:43-62
TGAATGAATATTGCAATCAATTTTCCTATT43CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus DNA, clone:LjB141g17_f.
AG227527.1:147-166
TGAATGAATATTGGAATCAATTTTCCTATT147CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus genomic DNA, clone: LjT45B13, TM0584.
AP007450.2:101617-101636
TGAATGAATATTGGAATCAATTTTCCTATT101617CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus genomic DNA, clone: LjT45B13, TM0584.
AP007450.2:103923-103942
TGAATGAATATTGGAATCAATTTTCCTATT103923CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus genomic DNA, chromosome 1, clone: LjT05K14, TM0926.
AP007684.2:68880-68899
TGAATGAATATTGGAATCAATTTTCCTATT68880CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus genomic DNA, chromosome 1, clone: LjT05K14, TM0926.
AP007684.2:71292-71311
TGAATGAATATTGGAATCAATTTTCCTATT71292CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATTCATGTGATTTCT
Lotus japonicus genomic DNA, chromosome 1, clone: LjT05P21, TM0032.
AP004500.1:712-731
TGAATGAATATTGGAATCAATTTTCCTATT712CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATTCATGTGATTTCT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT07P19, TM1556.
AP008154.1:39438-39457
TGAATGAATATTGGAATCAATTTTCCTATT39438CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:51863695-51863714
TGAATGAATATTGGAATCAATTTTCCTATT51863695CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:51866107-51866126
TGAATGAATATTGGAATCAATTTTCCTATT51866107CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:60502702-60502721
TGAATGAATATTGGAATCAATTTTCCTATT60502702CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:60504934-60504953
TGAATGAATATTGGAATCAATTTTCCTATT60504934CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:74871667-74871686
TGAATGAATATTAGAATCAATTTTCATATT74871667CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGTAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:87515006-87515025
TGAATGAATATTGGAATCAATTTTCCTATT87515006CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:87517297-87517316
TGAATGAATATTGGAATCAATTTTCCTATT87517297CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:110605369-110605388
TGAATGAATATTGGAATCAATTTTCCTATT110605369CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:133019549-133019568
TGAATGAATATTGGAATCAATTTTCATATT133019549CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:31440121-31440140
TGAATGAATATTGGAATCAATTTTCCTATT31440121CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:56980662-56980681
TGAATGAATATTGGAATCAATTTTCCTATT56980662CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:56983201-56983220
TGAATGAATATTGGAATCAATTTTCATATT56983201CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:35699551-35699570
TGAATGAATATTGGAATCAATTTTCCTATT35699551CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:35702301-35702320
TGAATGAATATTGGAATCAATTTTCCTATT35702301CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:30720618-30720637
TGAATGAATATTGGAATCAATTTTCCTATT30720618CTCCCTTTTGCTATGTTTGGGATCCCATTGAAGAAATCCATGTGATTTCT
Hibiscus tridactylites genome assembly, chromosome: 23.
OY288287.1:70325278-70325297
AAGCAGCTTAACAAGAATGGTCTGCAGGTA70325278CTCCCTTTTGCTATGTTTGGGAACCTAGAAAAGTTGTTGGTAGCTAATAG
Heterocephalus glaber genome assembly, chromosome: 9.
OX090949.1:32113595-32113614
TTGAAATTTTTCATTGGAAAATAAGAAAAA32113595CCAAACATAGCAAAAGGGAGACATTATTAAAGGACATGGAGCTCATAGAG
Heterocephalus glaber genome assembly, chromosome: 4.
OZ001069.1:31912732-31912751
TTGAAATTTTTCATTGGAAAATAAGAAAAA31912732CCAAACATAGCAAAAGGGAGACATTATTAAAGGACATGGAGCTCATAGAG
Heterocephalus glaber genome assembly, chromosome: 4.
OZ001112.1:32107956-32107975
TTGAAATTTTTCATTGGAAAATAAGAAAAA32107956CCAAACATAGCAAAAGGGAGACATTATTAAAGGACATGGAGCTCATAGAG
Lotus japonicus genomic DNA, chromosome 2, clone: LjT40H03, TM0828.
AP007620.2:27828-27847
AGAAATCACATGGATTTCTTCAATGGGATC27828CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus genomic DNA, chromosome 3, clone: LjT48M13, TM0882.
AP007659.2:15382-15401
AGAAATCACATGGATTTCTTCAATGGGATC15382CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus genomic DNA, chromosome 5, clone: LjT02D17, TM0986.
AP010595.1:88204-88223
AGAAATCACATGGATTTCTTCAATGGGATC88204CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT45F11, TM0122.
AP004949.1:7358-7377
AGAAATCACATGGATTTCTTCAATGGGATC7358CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:56046817-56046836
AGAAATCACATGGATTTCTTCAATGGGATC56046817CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATCCATTCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:56049086-56049105
AGAAATCACATGGATTTCTTCAATGGGATC56049086CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:75848745-75848764
TCACCTTATAGTCATCTCTGCAATGGGATC75848745CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:75851157-75851176
AGAAATCACATGGATTTCTTCAATGGGATC75851157CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:98954436-98954455
AGAAATTACATGGATTTCTTCAATGGGATC98954436CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:98956647-98956666
AGAAATCACATGGATTTCTTCAATGGGATC98956647CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:14564313-14564332
AGAAATCACATGGATTTCTTCAATGGGATC14564313CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:14566549-14566568
AGAAATCACATGGATTTCTTCAATGGGATC14566549CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:20715940-20715959
AGAAATCACATGGATTTCTTCAATGGGATC20715940CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:31284765-31284784
AGAAATCACATGGATTTCTTCAATGGGATC31284765CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:82398834-82398853
AGAAATCACATGGATTTCTTCAATGGGATC82398834CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:63711102-63711121
AGAAATCACATGGATTTCTTCAATGGGATC63711102CCAAACATAGCAAAAGGGAGAATAGCAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:79711115-79711134
AGAAATCACATGGATTTCTTCAATGGGATC79711115CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:31807412-31807431
AGAAACCACATGGATTTCTTCAATGGGATC31807412CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:31809609-31809628
AGAAACCACATGGATTTCTTCAATGGGATC31809609CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:50431581-50431600
AGAAATCACATGGATTTCTTCAATGGGATC50431581CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:8698911-8698930
AGAAATCACATGGATTTCTTCAATGGGATC8698911CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:8701194-8701213
AGAAATCACATGGATTTCTTCAATGGGATC8701194CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:19906306-19906325
AGAAATCACATGGATTTCTTCAATGGGATC19906306CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:24639256-24639275
TAGAAATCAATGGATTTCTTCAATGGGATC24639256CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:47140815-47140834
AGAAATCACATGGATTTCTTCAATGGGATC47140815CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:47143110-47143129
AGAAATCACATGGATTTCTTCAATGGGATC47143110CCAAACATAGCAAAAGGGAGAATAGGAAAATTGATTCCAATATTCATTCA
Hibiscus tridactylites genome assembly, chromosome: 12.
OY288276.1:5235864-5235883
CTATTAGCTACCAACAACTTTTCTAGGTTC5235864CCAAACATAGCAAAAGGGAGTACCTGCAGACCATTCTTGTTAAGCTGCTT
Pseudoalteromonas sp. KAN5 DNA, chromosome 1, complete sequence.
AP025589.1:149158-149177
CTGGCAATTTTAAATGCAATAATTACTAAG149158CCAAACATAGCAAAAGGGAGGGCAGCAAGTAAGTATTCTGTCAGGTTACT
Pseudoalteromonas sp. KG3 chromosome 1, complete sequence.
CP098523.1:3323115-3323134
CTGGCAATTTTAAAGGCAATTATTACTAAG3323115CCAAACATAGCAAAAGGGAGGGCTGCAAGTAAGTATTCTGTAAGGTGGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCCTTTTGCTATGTTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCCTTTTGCTATGTTTGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.435 | 0.426 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCCTTTTGCTATGTTTGG&k=0&no_gap=0&offset=0&limit=50
0.569 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAACATAGCAAAAGGGAG&k=0&no_gap=0&offset=0&limit=25
0.589 | 0.020 | cgi_end;

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