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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:28:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Homo sapiens PAC clone RP4-568B10 from 7, complete sequence.
AC004836.2:11422-11441
AAATCTGGCAAGCTGCCTACATTCCTTACC11422CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens genomic DNA, chromosome 11 clone:RP11-684B2, complete sequences.
AP000867.5:11359-11378
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG11359CTCCTACCCCTCCTCCTTTCTCTTCCCCTGCCCTCACTGCCTCTTCCACG
Homo sapiens genomic DNA, chromosome 11 clone:RP11-660L16, complete sequence.
AP002387.4:105560-105579
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG105560CTCCTACCCCTCCTCCTTTCTCTTCCCCTGCCCTCACTGCCTCTTCCACG
Homo sapiens DNA, chromosome 7, nearly complete genome.
AP023467.1:104862416-104862435
AAATCTGGCAAGCTGCCTACATTCCTTACC104862416CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens DNA, chromosome 11, nearly complete genome.
AP023471.1:67953398-67953417
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG67953398CTCCTACCCCTCCTCCTTTCTCTTCCCCCGCCCTCACTGCCTCTTCCACG
Homo sapiens isolate CHM13 chromosome 11.
CP068267.2:71410426-71410445
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG71410426CTCCTACCCCTCCTCCTTTCTCTTCCCCCGCCCTCACTGCCTCTTCCACG
Homo sapiens isolate CHM13 chromosome 7.
CP068271.2:107297953-107297972
AAATCTGGCAAGCTGCCTACATTCCTTACC107297953CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens isolate NA24385 chromosome 7.
CP139514.1:107535029-107535048
AAATCTGGCAAGCTGCCTACATTCCTTACC107535029CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens isolate NA24385 chromosome 11.
CP139532.1:71535049-71535068
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG71535049CTCCTACCCCTCCTCCTTTCTCTTCCCCCGCCCTCACTGCCTCTTCCACG
Homo sapiens isolate NA24385 chromosome 7.
CP139537.1:106519903-106519922
AAATCTGGCAAGCTGCCTACATTCCTTACC106519903CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens isolate NA24385 chromosome 11.
CP139555.1:70316360-70316379
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG70316360CTCCTACCCCTCCTCCTTTCTCTTCCCCCGCCCTCACTGCCTCTTCCACG
Macaca fascicularis complete genome, chromosome chr1.
LT160000.1:199642294-199642313
ACATACAAGCTTTAACACACTACAGTCAAG199642294CTCCTACCCCTCCTCCTTTCATTCCATGATACATTTTGGAAGAAGTCAGC
Mus spretus genome assembly, chromosome: 11.
OW971689.1:16380986-16381005
TCCTCCTCCTCCTCCTCCCCCCTCCTCCTC16380986CTCCTACCCCTCCTCCTTTCCCAAGAATTTTTTTTTAAATCTCTGCTTTG
Muscardinus avellanarius genome assembly, chromosome: 2.
OY726558.1:3328113-3328132
CGTTTCTCTGAGCACAGAACCTCAGCGGCA3328113CTCCTACCCCTCCTCCTTTCAAGCCCCTTCCTGGTGGAAATCCTGGGGTC
Micromys minutus genome assembly, chromosome: 11.
OZ004791.1:50953104-50953123
CCCAAAGAGTCAGGTTCTCCAGAGGCTCTG50953104CTCCTACCCCTCCTCCTTTCCTGGCAAGGATCCCAGTGGCTGCACCACCA
Myotis daubentonii genome assembly, chromosome: 12.
OY725371.1:19463167-19463186
CTTCTTCCCTCCCATCCTCCCTGCCCATTG19463167CTCCTACCCCTCCTCCTTTCAAATCTGTCCCCACCACACCATTCCCTCCT
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:591140109-591140128
TCTCTACTCCTGACCCTGTCAATACTTTTA591140109CTCCTACCCCTCCTCCTTTCCCTAGCACTCCTGCCCTCATCCTCCCCCTC
Danio kyathit genome assembly, chromosome: 9.
LR812527.1:52853532-52853551
ATAAATAACCAAAGTTCCATACCACTTCCA52853532CTCCTACCCCTCCTCCTTTCCTAGAGTTTAATAGAATTTCCTAGAATTTC
Platichthys flesus genome assembly, chromosome: 5.
OX438720.1:17165021-17165040
TCAACTGTCTGCTTCACTTTCTTCCAGCTG17165021CTCCTACCCCTCCTCCTTTCCTGTGCAAAGACATGAACACAGCATGGGAG
Ammodytes marinus genome assembly, chromosome: 7.
OX465151.1:11339686-11339705
TCTTCTTCTTTTCTTGTATAACCCCCTCCT11339686CTCCTACCCCTCCTCCTTTCCTTTTGAAAGATGTGATAATTCATAAACAA
Borostomias antarcticus genome assembly, chromosome: 4.
OX465207.1:35828106-35828125
CCCCTTCTCTTCACCCACCCGTCCTCTTCT35828106CTCCTACCCCTCCTCCTTTCCACTCCTCCTCCTCTCTTCTACTCCTCCTC
Xyrichtys novacula genome assembly, chromosome: 6.
OY660869.1:8809643-8809662
ACACACCTAAAATACACTCCTCATTCCCGG8809643CTCCTACCCCTCCTCCTTTCATCAATCCTTCTCTTTTATCTCCTCTTTTC
Sequence 21 from Patent WO2005042786.
CS086317.1:3640-3659
AAATCTGGCAAGCTGCCTACATTCCTTACC3640CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Sequence 21 from patent US 7534875.
GP435844.1:3640-3659
AAATCTGGCAAGCTGCCTACATTCCTTACC3640CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Eukaryotic synthetic construct chromosome 11.
CP034489.1:71134508-71134527
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG71134508CTCCTACCCCTCCTCCTTTCTCTTCCCCTGCCCTCACTGCCTCTTCCACG
Eukaryotic synthetic construct chromosome 7.
CP034506.1:105612981-105613000
AAATCTGGCAAGCTGCCTACATTCCTTACC105612981CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Eukaryotic synthetic construct chromosome 11.
CP034514.1:71134508-71134527
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG71134508CTCCTACCCCTCCTCCTTTCTCTTCCCCTGCCCTCACTGCCTCTTCCACG
Eukaryotic synthetic construct chromosome 7.
CP034531.1:105612981-105613000
AAATCTGGCAAGCTGCCTACATTCCTTACC105612981CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens chromosome UNK clone CTD-2060N15, WORKING DRAFT SEQUENCE, 15 unordered pieces.
AC087055.1:79045-79064
AAATCTGGCAAGCTGCCTACATTCCTTACC79045CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Oldenlandia corymbosa var. corymbosa genome assembly, chromosome: 1.
OX459118.1:4679908-4679927
ACATTAGTGCAAAATATCGGCTTCCCCGTG4679908CTCCTACCCCTCCTCCTTTCTTCGCCCTCAAAAACTAACACTTCCAAATC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:503962253-503962272
CTCCTCTTCTTTTCTGCCGTCCCAGCCACC503962253CTCCTACCCCTCCTCCTTTCTTCCCTGCTACGGCTGCTACTGCTCTTTCC
Macrobrachium nipponense isolate FS-2020 chromosome 42.
CP062051.1:26133745-26133764
GCCTCCCGTTTCCCCTCTCCCCTCCTCTTC26133745CTCCTACCCCTCCTCCTTTCCCCGTTCATGCATCAAGTTAGGTGTAAAAC
4_Tbi_b3v08.
OD564636.1:169095-169114
GATTCCTTTGTATACCTTCTTTAAACATGT169095CTCCTACCCCTCCTCCTTTCAACAGTTGCTGACCTTTATTTTCACCCTAG
4_Tte_b3v08.
OE000021.1:170007-170026
GATTCCTTTGTATACCTTCTTTAAACATGT170007CTCCTACCCCTCCTCCTTTCAACAGTTGCTGACCTTTATTTTCACCCTAG
Protula sp. h YS-2021 genome assembly, chromosome: 6.
OX457029.1:7800039-7800058
ACTCTCTCTCTCTTGTTTCTCTCCCTTTTC7800039CTCCTACCCCTCCTCCTTTCTCTCTCTCTCTTTCTTTTTATCTCTCCCCT
Labia minor genome assembly, chromosome: 2.
OY720345.1:12288247-12288266
GATATATTCTTACTAATGAATCAACCCAGA12288247CTCCTACCCCTCCTCCTTTCTTCTTCTATCAACAGATGGACTAAATTAAT
Homo sapiens chromosome unknown clone VMRC59-386H18, complete sequence.
AC279651.1:137823-137842
CGTGGAAGAGGCAGTGAGGGCGGGGGAAGA137823GAAAGGAGGAGGGGTAGGAGCCAGCCTGCAGCCAACTCCCAGGACCTGCT
Pan troglodytes BAC clone RP43-31J11 from chromosome 7, complete sequence.
AC148310.2:141457-141476
CGTGGAAGAGGCAGTGAGGGCGGGGGAAGA141457GAAAGGAGGAGGGGTAGGAGCCAGCCTGCAGCCAACTCCCAGGACCTGCT
Micromys minutus genome assembly, chromosome: 1.
OZ004780.1:222589852-222589871
TGCAGAAACATTGCTGACAGCAGCAGATAA222589852GAAAGGAGGAGGGGTAGGAGCTGGATTCAAGCTCCAGGATGGCTGGACTT
Erinaceus europaeus genome assembly, chromosome: 10.
OX485820.1:43247680-43247699
TGCTAGTATGCCAAGAAAGGAGGAGGTAGG43247680GAAAGGAGGAGGGGTAGGAGGAGAAGGCTCTTTACTTTTAACATATGCAT
Plecotus auritus genome assembly, chromosome: 9.
OY734030.1:25628349-25628368
CAGACACAGGCAACAGTATGGTGGTTAACA25628349GAAAGGAGGAGGGGTAGGAGGGAGAGGTTAAAGAGAGTAAAGGGGTCCCC
Plecotus auritus genome assembly, chromosome: 12.
OY734034.1:36019621-36019640
TTCTCCATTGATTTTTAGACAGAGAGGAAG36019621GAAAGGAGGAGGGGTAGGAGAAGGGTGGGGGGAGAGACAGGTTGGTTGCT
Geotrypetes seraphini genome assembly, chromosome: 2.
LR699147.1:14913723-14913742
ACCTCAAGGCGACTTAAAGAGGAGGGGTGA14913723GAAAGGAGGAGGGGTAGGAGAAGGGAAGAAGTGGGGGGAGGGAGAGGGAT
Danio rerio genome assembly, chromosome: 18.
LR812055.1:673842-673861
AACCACTGGGCCACCGTGCCTCCTATCTAG673842GAAAGGAGGAGGGGTAGGAGTGGAAGGGGGGATTCTTTAAAAGGAAGATG
Meleagris gallopavo genome assembly, chromosome: 2.
OW982253.1:62640257-62640276
CGCAGGGGATCAGACCACTGCAGTCTGTGA62640257GAAAGGAGGAGGGGTAGGAGTGGGACTTCTCCTTTGGCATAGACTCAGCT
Meleagris gallopavo genome assembly, chromosome: 2.
OW982292.1:62684706-62684725
CGCAGGGGATCAGACCACTGCAGTCTGTGA62684706GAAAGGAGGAGGGGTAGGAGTGGGACTTCTCCTTTGGCATAGACTCAGCT
Danio rerio genome assembly, chromosome: 18.
OX063307.1:763662-763681
AACCACTGGGCCACCGTGCCTCCTATCTAG763662GAAAGGAGGAGGGGTAGGAGTGGAAGGGGGGATTCTTTAAAAGGAAGATG
Pleuronectes platessa genome assembly, chromosome: 3.
OX374650.1:13139643-13139662
CTCCCATGCTGTGTTCATGTCTTTGCACAG13139643GAAAGGAGGAGGGGTAGGAGCAGCTGGAAGAAAGTGAAGCAGACATTTGA
Hyperoplus immaculatus genome assembly, chromosome: 12.
OX442360.1:23281429-23281448
TTGTTAATGAATTATCACATCTTTCAAAAG23281429GAAAGGAGGAGGGGTAGGAGAGGAGGGGGTTATACAGGAAAAGAAGAAGA
Somateria mollissima genome assembly, chromosome: 2.
OX598303.1:74245850-74245869
ATGACACCATGTTCAGCAATAAATGCTGGG74245850GAAAGGAGGAGGGGTAGGAGTTCAGAGTGATGTCATTTGACTTCCCAAAT
Somateria mollissima genome assembly, chromosome: 2.
OX598691.1:74151793-74151812
ATGACACCATGTTCAGCAATAAATGCTGGG74151793GAAAGGAGGAGGGGTAGGAGTTCAGAGTGATGTCATTTGACTTCCCAAAT
Argentina silus genome assembly, chromosome: 1.
OX637368.1:22949935-22949954
GTGGCTTCATCAGTGCACCCATTAAGGATT22949935GAAAGGAGGAGGGGTAGGAGACACAGACAAGACACAAAACATGTTCAAAG
Limanda limanda genome assembly, chromosome: 2.
OY754993.1:14727071-14727090
CTCCCATGCTGTGCTCATGCCTTTGCACAG14727071GAAAGGAGGAGGGGTAGGAGCAGCTGGAAGAAAGAGAAGTTGAAAACAGT
wu33g02.x1 Soares_Dieckgraefe_colon_NHCD Homo sapiens cDNA clone IMAGE:2521874 3' similar to contains Alu repetitive element;contains element MSR1 repetitive element, mRNA sequence.
AW001512.1:431-450
CTGGGTCACAGGGACTGAGGGGGAGAAGGG431GAAAGGAGGAGGGGTAGGAGGGT
EG-A11_011_E03 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600508.1:171-190
GATAGATAAGGTAATAGGGGAAGGAAGGAA171GAAAGGAGGAGGGGTAGGAGAAGAAGAAGAAGGCCGCGGCAGAAGCAGCG
OPMF02240 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W348.seq T3, mRNA sequence.
EL685997.1:163-182
GATAGATAAGGTAATAGGGGAAGGAAGGAA163GAAAGGAGGAGGGGTAGGAGAAGAAGAAGAAGGCCGCGGCAGAAGCAGCG
OPMF02398 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W540.seq T3, mRNA sequence.
EL686155.1:169-188
GATAGATAAGGTAATAGGGGAAGGAAGGAA169GAAAGGAGGAGGGGTAGGAGAAGAAGAAGAAGGCCGCGGCAGAAGCAGCG
pOP-EO03535_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO03535 5', mRNA sequence.
EY408782.1:178-197
GATAGATAAGGTAATAGGGGAAGGAAGGAA178GAAAGGAGGAGGGGTAGGAGAAGAAGAACAAGGCCGCGGCACAAGCAGCG
pOP-MT00060 MT (Oil Palm Mesocarp) Elaeis guineensis cDNA clone pOP-MT00060 5', mRNA sequence.
JK629472.1:51-70
GATAGATAAGGTAATAGGGGAAGGAAGGAA51GAAAGGAGGAGGGGTAGGAGAAGAAGAAGAAGGCCGCGGCAGAAGCAGCG
Elaeis guineensis EST, clone (6lib)_isotig31864.
LM626647.1:172-191
GATAGATAAGGTAATAGGGGAAGGAAGGAA172GAAAGGAGGAGGGGTAGGAGAAGAAGAAGAAGGCCGCGGCAGAAGCAGCG
TSA: Elaeis guineensis isotig07499.Elguifruit mRNA sequence.
JO094734.1:168-187
GATAGATAAGGTAATAGGGGAAGGAAGGAA168GAAAGGAGGAGGGGTAGGAGAAGAAGAAGAAGGCCGCGGCAGAAGCAGCG
CMCMBd0194K10r CMCMBd Chinese Chestnut BAC Library (EcoRI) Castanea mollissima genomic, genomic survey sequence.
KG015347.1:133-152
TCACTCTCTCTCAACTTTTTATGCCTTGGA133GAAAGGAGGAGGGGTAGGAGAGGCTGAAAGTGAAAAGAGAAAGTTTTGAA
Chlamydomonas reinhardtii strain CC-5816 chromosome 4.
CP097814.1:3799096-3799115
GGTTTTATGCCCGAGCCAGCGAGTACGAAA3799096GAAAGGAGGAGGGGTAGGAGCACATACCTCGCAGCGTCTACGCTTCCCGT
Astragalus glycyphyllos genome assembly, chromosome: 5.
OY754311.1:65812589-65812608
CAAAATTTATGGAAGGAATCAAATTAGAAA65812589GAAAGGAGGAGGGGTAGGAGTGTTAGGCTTAGTGAAGCTAAAAACCAATA
Macrobrachium nipponense isolate FS-2020 chromosome 46.
CP062041.1:37459871-37459890
GGGGGGAGGGGGGAGGAGGAGGAGGAGGAG37459871GAAAGGAGGAGGGGTAGGAGAGAGAGAGAGGATGTCGCAAGCAAGAAGGC
1_Tdi_b3v08.
OA569772.1:10098-10117
ATAAGGACTCTTGAAGATGAGTACATAGAG10098GAAAGGAGGAGGGGTAGGAGAAGTGAAGGAAGCTAAGGAGAGGGGAAAGG
Meconema thalassinum genome assembly, chromosome: X.
OX336389.2:675105996-675106015
CACTCTAAAACATTATGACCCGGTTGGGAA675105996GAAAGGAGGAGGGGTAGGAGCTTTCATTAAGTCAAACCTAAACCCTAAAG
Meconema thalassinum genome assembly, chromosome: 10.
OX336398.1:127726096-127726115
CACTCTAATACGTAATGACGGTGTCGGGAA127726096GAAAGGAGGAGGGGTAGGAGCTTTCGTTAAGTCAAACCTTAATCCTAAAG
Mecyna flavalis genome assembly, chromosome: 7.
OX439432.1:685047-685066
ATTCCCTAAGCCTAGGCTGATCTTCGTATC685047GAAAGGAGGAGGGGTAGGAGGTGAATGTAAATTAAGTAGCTACAGAGTAT
Amphimallon solstitiale genome assembly, chromosome: 7.
OY720681.1:13262174-13262193
CCCAAGCCTGAGGTCCTATTGCACAAACGG13262174GAAAGGAGGAGGGGTAGGAGTAACAACCTCGGAAAAAAACCAGGATTCAT
Sepia lycidas genome assembly, chromosome: 2.
OZ010572.1:12173807-12173826
ATAAAAAACGCACGAACTTTTGGTGTGATA12173807GAAAGGAGGAGGGGTAGGAGAAAAATAACTGAAAGAAGAAAGACGAGGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCTACCCCTCCTCCTTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCTACCCCTCCTCCTTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.253 | 0.244 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCTACCCCTCCTCCTTTC&k=0&no_gap=0&offset=0&limit=50
0.973 | 0.720 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAGGAGGAGGGGTAGGAG&k=0&no_gap=0&offset=0&limit=14
0.996 | 0.023 | cgi_end;

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