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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-03-02 18:04:45, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens PAC clone RP4-568B10 from 7, complete sequence.
AC004836.2:11422-11441
AAATCTGGCAAGCTGCCTACATTCCTTACC11422CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens genomic DNA, chromosome 11 clone:RP11-684B2, complete sequences.
AP000867.5:11359-11378
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG11359CTCCTACCCCTCCTCCTTTCTCTTCCCCTGCCCTCACTGCCTCTTCCACG
Homo sapiens genomic DNA, chromosome 11 clone:RP11-660L16, complete sequence.
AP002387.4:105560-105579
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG105560CTCCTACCCCTCCTCCTTTCTCTTCCCCTGCCCTCACTGCCTCTTCCACG
Homo sapiens DNA, chromosome 7, nearly complete genome.
AP023467.1:104862416-104862435
AAATCTGGCAAGCTGCCTACATTCCTTACC104862416CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens DNA, chromosome 11, nearly complete genome.
AP023471.1:67953398-67953417
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG67953398CTCCTACCCCTCCTCCTTTCTCTTCCCCCGCCCTCACTGCCTCTTCCACG
Homo sapiens isolate CHM13 chromosome 11.
CP068267.2:71410426-71410445
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG71410426CTCCTACCCCTCCTCCTTTCTCTTCCCCCGCCCTCACTGCCTCTTCCACG
Homo sapiens isolate CHM13 chromosome 7.
CP068271.2:107297953-107297972
AAATCTGGCAAGCTGCCTACATTCCTTACC107297953CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens isolate NA24385 chromosome 7.
CP139514.2:107534960-107534979
AAATCTGGCAAGCTGCCTACATTCCTTACC107534960CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens isolate NA24385 chromosome 11.
CP139532.2:71535016-71535035
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG71535016CTCCTACCCCTCCTCCTTTCTCTTCCCCCGCCCTCACTGCCTCTTCCACG
Homo sapiens isolate NA24385 chromosome 7.
CP139537.2:106519843-106519862
AAATCTGGCAAGCTGCCTACATTCCTTACC106519843CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens isolate NA24385 chromosome 11.
CP139555.2:70316306-70316325
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG70316306CTCCTACCCCTCCTCCTTTCTCTTCCCCCGCCCTCACTGCCTCTTCCACG
Macaca fascicularis isolate 582-1 chromosome 1.
CP141361.1:26444050-26444069
ACATACAAGCTTTAACACACTACAGTCAAG26444050CTCCTACCCCTCCTCCTTTCATTCCATGATACATTTTGGAAGAAGTCAGC
Macaca fascicularis complete genome, chromosome chr1.
LT160000.1:199642294-199642313
ACATACAAGCTTTAACACACTACAGTCAAG199642294CTCCTACCCCTCCTCCTTTCATTCCATGATACATTTTGGAAGAAGTCAGC
Mus spretus genome assembly, chromosome: 11.
OW971689.1:16380986-16381005
TCCTCCTCCTCCTCCTCCCCCCTCCTCCTC16380986CTCCTACCCCTCCTCCTTTCCCAAGAATTTTTTTTTAAATCTCTGCTTTG
Muscardinus avellanarius genome assembly, chromosome: 2.
OY726558.1:3328113-3328132
CGTTTCTCTGAGCACAGAACCTCAGCGGCA3328113CTCCTACCCCTCCTCCTTTCAAGCCCCTTCCTGGTGGAAATCCTGGGGTC
Micromys minutus genome assembly, chromosome: 11.
OZ004791.1:50953104-50953123
CCCAAAGAGTCAGGTTCTCCAGAGGCTCTG50953104CTCCTACCCCTCCTCCTTTCCTGGCAAGGATCCCAGTGGCTGCACCACCA
Apodemus agrarius genome assembly, chromosome: 1.
OZ030005.1:62159397-62159416
TCCTCCTACCTCTCCCTCCTCCTTCAACTC62159397CTCCTACCCCTCCTCCTTTCTCTTCCACTTTCTCTTTTTCTTCCCCTTCT
Myotis daubentonii genome assembly, chromosome: 12.
OY725371.1:19463167-19463186
CTTCTTCCCTCCCATCCTCCCTGCCCATTG19463167CTCCTACCCCTCCTCCTTTCAAATCTGTCCCCACCACACCATTCCCTCCT
Neogale vison genome assembly, chromosome: 2.
OZ067084.1:201840721-201840740
GCTTTTCTTCACTGACTCAATACTTTTCTA201840721CTCCTACCCCTCCTCCTTTCCCTTCCCTAGACTCTCTTGTCCATAGAAAG
Neogale vison genome assembly, chromosome: 2.
OZ067340.1:201681242-201681261
GCTTTTCTTCACTGACTCAATACTTTTCTA201681242CTCCTACCCCTCCTCCTTTCCCTTCCCTAGACTCTCTTGTCCATAGAAAG
Miniopterus schreibersii genome assembly, chromosome: 1.
OZ071092.1:65881519-65881538
AATCTGACCTGACTCCTTCTCCAACCTCAT65881519CTCCTACCCCTCCTCCTTTCCCATCCCACTTCACCCTCCCCTTCAACTTC
Sequence 21 from Patent WO2005042786.
CS086317.1:3640-3659
AAATCTGGCAAGCTGCCTACATTCCTTACC3640CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Sequence 21 from patent US 7534875.
GP435844.1:3640-3659
AAATCTGGCAAGCTGCCTACATTCCTTACC3640CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Eukaryotic synthetic construct chromosome 11.
CP034489.1:71134508-71134527
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG71134508CTCCTACCCCTCCTCCTTTCTCTTCCCCTGCCCTCACTGCCTCTTCCACG
Eukaryotic synthetic construct chromosome 7.
CP034506.1:105612981-105613000
AAATCTGGCAAGCTGCCTACATTCCTTACC105612981CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Eukaryotic synthetic construct chromosome 11.
CP034514.1:71134508-71134527
AGCAGGTCCTGGGAGTTGGCTGCAGGCTGG71134508CTCCTACCCCTCCTCCTTTCTCTTCCCCTGCCCTCACTGCCTCTTCCACG
Eukaryotic synthetic construct chromosome 7.
CP034531.1:105612981-105613000
AAATCTGGCAAGCTGCCTACATTCCTTACC105612981CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Homo sapiens chromosome UNK clone CTD-2060N15, WORKING DRAFT SEQUENCE, 15 unordered pieces.
AC087055.1:79045-79064
AAATCTGGCAAGCTGCCTACATTCCTTACC79045CTCCTACCCCTCCTCCTTTCCCCTTCTCCCCCTCAGTCCCTGTGACCCAG
Oldenlandia corymbosa var. corymbosa genome assembly, chromosome: 1.
OX459118.1:4679908-4679927
ACATTAGTGCAAAATATCGGCTTCCCCGTG4679908CTCCTACCCCTCCTCCTTTCTTCGCCCTCAAAAACTAACACTTCCAAATC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:503962253-503962272
CTCCTCTTCTTTTCTGCCGTCCCAGCCACC503962253CTCCTACCCCTCCTCCTTTCTTCCCTGCTACGGCTGCTACTGCTCTTTCC
Macrobrachium nipponense isolate FS-2020 chromosome 42.
CP062051.1:26133745-26133764
GCCTCCCGTTTCCCCTCTCCCCTCCTCTTC26133745CTCCTACCCCTCCTCCTTTCCCCGTTCATGCATCAAGTTAGGTGTAAAAC
4_Tbi_b3v08.
OD564636.1:169095-169114
GATTCCTTTGTATACCTTCTTTAAACATGT169095CTCCTACCCCTCCTCCTTTCAACAGTTGCTGACCTTTATTTTCACCCTAG
4_Tte_b3v08.
OE000021.1:170007-170026
GATTCCTTTGTATACCTTCTTTAAACATGT170007CTCCTACCCCTCCTCCTTTCAACAGTTGCTGACCTTTATTTTCACCCTAG
Protula sp. h YS-2021 genome assembly, chromosome: 6.
OX457029.1:7800039-7800058
ACTCTCTCTCTCTTGTTTCTCTCCCTTTTC7800039CTCCTACCCCTCCTCCTTTCTCTCTCTCTCTTTCTTTTTATCTCTCCCCT
Labia minor genome assembly, chromosome: 2.
OY720345.1:12288247-12288266
GATATATTCTTACTAATGAATCAACCCAGA12288247CTCCTACCCCTCCTCCTTTCTTCTTCTATCAACAGATGGACTAAATTAAT
Denticollis linearis genome assembly, chromosome: X.
OZ123676.1:68882888-68882907
GCTGAACCCTGTTTTTTTACGAGGTTGTTA68882888CTCCTACCCCTCCTCCTTTCGCATCCTGACTTGGGACAGGCAATGGTAGA
Millepora dichotoma genome assembly, chromosome: 12.
OZ218613.1:26039672-26039691
TAAAATTACACAGTGCAAATAAAAGCAGAC26039672CTCCTACCCCTCCTCCTTTCACATAACTTTTTGAGGTCTGTGTACAAAAG
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:591140109-591140128
TCTCTACTCCTGACCCTGTCAATACTTTTA591140109CTCCTACCCCTCCTCCTTTCCCTAGCACTCCTGCCCTCATCCTCCCCCTC
Danio kyathit genome assembly, chromosome: 9.
LR812527.1:52853532-52853551
ATAAATAACCAAAGTTCCATACCACTTCCA52853532CTCCTACCCCTCCTCCTTTCCTAGAGTTTAATAGAATTTCCTAGAATTTC
Platichthys flesus genome assembly, chromosome: 5.
OX438720.1:17165021-17165040
TCAACTGTCTGCTTCACTTTCTTCCAGCTG17165021CTCCTACCCCTCCTCCTTTCCTGTGCAAAGACATGAACACAGCATGGGAG
Ammodytes marinus genome assembly, chromosome: 7.
OX465151.1:11339686-11339705
TCTTCTTCTTTTCTTGTATAACCCCCTCCT11339686CTCCTACCCCTCCTCCTTTCCTTTTGAAAGATGTGATAATTCATAAACAA
Borostomias antarcticus genome assembly, chromosome: 4.
OX465207.1:35828106-35828125
CCCCTTCTCTTCACCCACCCGTCCTCTTCT35828106CTCCTACCCCTCCTCCTTTCCACTCCTCCTCCTCTCTTCTACTCCTCCTC
Xyrichtys novacula genome assembly, chromosome: 6.
OY660869.1:8809643-8809662
ACACACCTAAAATACACTCCTCATTCCCGG8809643CTCCTACCCCTCCTCCTTTCATCAATCCTTCTCTTTTATCTCCTCTTTTC
Nansenia antarctica genome assembly, chromosome: 5.
OZ022343.1:5583487-5583506
CTCTTCCTCCTCTCCTCCTCCTGCCCTCTC5583487CTCCTACCCCTCCTCCTTTCCTCCACCACCTTCTCTCCTCCCCCTCCTCC
Bucephala clangula genome assembly, chromosome: 3.
OZ060835.1:85156412-85156431
ATTTGGGAAGTCAAATGACATCACTCTGAA85156412CTCCTACCCCTCCTCCTTTCCCCAGCATTTATTGCTGAACATGGTGTCAT
Lissotriton helveticus genome assembly, chromosome: 7.
OZ180053.1:824342416-824342435
CTCCCAGCGCTGCTGCACCTTCCTGCCCGC824342416CTCCTACCCCTCCTCCTTTCACTCCCCTCTCCGGTACGTGGTGCACTCCC
Lissotriton vulgaris genome assembly, chromosome: 1_1.
OZ183349.1:1140652191-1140652210
CTCTCTCCGCGCACTGTCTCTATTCTTGCT1140652191CTCCTACCCCTCCTCCTTTCCATGCTTATCCTTCTCTGGCTGTTCTTCTT
Natrix helvetica genome assembly, chromosome: 1.
OZ187402.1:376232908-376232927
GCTCTTCTCTCCCCTCCTTCCTTCTTTCCT376232908CTCCTACCCCTCCTCCTTTCCTTTTTGAGTCCTCCCCTTCTCTTGTTTCC
Natrix maura genome assembly, chromosome: 14.
OZ211068.1:5036997-5037016
CTCCTCCTCCTTCTTCCTCCTCCTCCATTT5036997CTCCTACCCCTCCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT
Homo sapiens chromosome unknown clone VMRC59-386H18, complete sequence.
AC279651.1:137823-137842
CGTGGAAGAGGCAGTGAGGGCGGGGGAAGA137823GAAAGGAGGAGGGGTAGGAGCCAGCCTGCAGCCAACTCCCAGGACCTGCT
Pan troglodytes BAC clone RP43-31J11 from chromosome 7, complete sequence.
AC148310.2:141457-141476
CGTGGAAGAGGCAGTGAGGGCGGGGGAAGA141457GAAAGGAGGAGGGGTAGGAGCCAGCCTGCAGCCAACTCCCAGGACCTGCT
Micromys minutus genome assembly, chromosome: 1.
OZ004780.1:222589852-222589871
TGCAGAAACATTGCTGACAGCAGCAGATAA222589852GAAAGGAGGAGGGGTAGGAGCTGGATTCAAGCTCCAGGATGGCTGGACTT
Ovis aries breed hu sheep isolate hu3095 chromosome 1.
CP162240.1:156632463-156632482
AATGAACTAGTGTTTACCAGTGGAGAGAGG156632463GAAAGGAGGAGGGGTAGGAGAGTAAAAGGCACAAACTATTAGGCAAAAAA
wu33g02.x1 Soares_Dieckgraefe_colon_NHCD Homo sapiens cDNA clone IMAGE:2521874 3' similar to contains Alu repetitive element;contains element MSR1 repetitive element, mRNA sequence.
AW001512.1:431-450
CTGGGTCACAGGGACTGAGGGGGAGAAGGG431GAAAGGAGGAGGGGTAGGAGGGT
TSA: Elaeis guineensis isotig07499.Elguifruit mRNA sequence.
JO094734.1:168-187
GATAGATAAGGTAATAGGGGAAGGAAGGAA168GAAAGGAGGAGGGGTAGGAGAAGAAGAAGAAGGCCGCGGCAGAAGCAGCG
CMCMBd0194K10r CMCMBd Chinese Chestnut BAC Library (EcoRI) Castanea mollissima genomic, genomic survey sequence.
KG015347.1:133-152
TCACTCTCTCTCAACTTTTTATGCCTTGGA133GAAAGGAGGAGGGGTAGGAGAGGCTGAAAGTGAAAAGAGAAAGTTTTGAA
Chlamydomonas reinhardtii strain CC-5816 chromosome 4.
CP097814.1:3799096-3799115
GGTTTTATGCCCGAGCCAGCGAGTACGAAA3799096GAAAGGAGGAGGGGTAGGAGCACATACCTCGCAGCGTCTACGCTTCCCGT
Chenopodium quinoa genome assembly, chromosome: Cq9A.
OY737714.1:23882296-23882315
TGACCCTAACCCCTTCTCAGACCACTCGTC23882296GAAAGGAGGAGGGGTAGGAGTGTCGAGTACTCGAGCTTCATAAACTTCAG
Astragalus glycyphyllos genome assembly, chromosome: 5.
OY754311.1:65812589-65812608
CAAAATTTATGGAAGGAATCAAATTAGAAA65812589GAAAGGAGGAGGGGTAGGAGTGTTAGGCTTAGTGAAGCTAAAAACCAATA
Ranunculus sceleratus genome assembly, chromosome: 9.
OZ205671.1:7696674-7696693
CTTCGCTAAGGCCACATCTTCTTCGGTTGA7696674GAAAGGAGGAGGGGTAGGAGGTGGAGGAGGAGGGACATTGGAAGATTCCG
Macrobrachium nipponense isolate FS-2020 chromosome 46.
CP062041.1:37459871-37459890
GGGGGGAGGGGGGAGGAGGAGGAGGAGGAG37459871GAAAGGAGGAGGGGTAGGAGAGAGAGAGAGGATGTCGCAAGCAAGAAGGC
Meconema thalassinum genome assembly, chromosome: X.
OX336389.2:675105996-675106015
CACTCTAAAACATTATGACCCGGTTGGGAA675105996GAAAGGAGGAGGGGTAGGAGCTTTCATTAAGTCAAACCTAAACCCTAAAG
Amphimallon solstitiale genome assembly, chromosome: 7.
OY720681.1:13262174-13262193
CCCAAGCCTGAGGTCCTATTGCACAAACGG13262174GAAAGGAGGAGGGGTAGGAGTAACAACCTCGGAAAAAAACCAGGATTCAT
Sepia lycidas genome assembly, chromosome: 2.
OZ010572.1:12173807-12173826
ATAAAAAACGCACGAACTTTTGGTGTGATA12173807GAAAGGAGGAGGGGTAGGAGAAAAATAACTGAAAGAAGAAAGACGAGGAA
Denticollis linearis genome assembly, chromosome: 7.
OZ123673.1:111792372-111792391
TCCACCATTGCCTGTCCCAAGTCAGGATGC111792372GAAAGGAGGAGGGGTAGGAGTAACAACCTCGTAAAAAACCAGGGTTCAGC
Meleagris gallopavo genome assembly, chromosome: 2.
HG999681.4:62623349-62623368
CGCAGGGGATCAGACCACTGCAGTCTGTGA62623349GAAAGGAGGAGGGGTAGGAGTGGGACTTCTCCTTTGGCATAGACTCAGCT
Meleagris gallopavo genome assembly, chromosome: 2.
OW982253.1:62640257-62640276
CGCAGGGGATCAGACCACTGCAGTCTGTGA62640257GAAAGGAGGAGGGGTAGGAGTGGGACTTCTCCTTTGGCATAGACTCAGCT
Nansenia antarctica genome assembly, chromosome: 5.
OZ022343.1:55477473-55477492
AAAGAGAGAAGGGGGGAAGAAAGAAAGAAA55477473GAAAGGAGGAGGGGTAGGAGAGAAGAGGATGGTCACACTAACAATGACAA
Lissotriton helveticus genome assembly, chromosome: 4_1.
OZ180048.1:1454119010-1454119029
AAGAAGAACAGCCAGAGAAGGATAAGCAGG1454119010GAAAGGAGGAGGGGTAGGAGAGCAAGAATAGAGACAGTGCGCGGAGAGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCTACCCCTCCTCCTTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCTACCCCTCCTCCTTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.275 | 0.266 | search_plus_done; http://172.18.8.135:50800/match?q=CTCCTACCCCTCCTCCTTTC&k=0&no_gap=0&offset=0&limit=50
0.511 | 0.236 | search_minus_done; http://172.18.8.135:50800/match?q=GAAAGGAGGAGGGGTAGGAG&k=0&no_gap=0&offset=0&limit=1
0.524 | 0.014 | cgi_end;

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