GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:05:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 1, clone: LjB18G14, BM1106.
AP007809.2:7373-7392
TAGTTGTTAGTAAATTGGTACAAATTATCT7373CTCCTCAGGGTTCGAATCCTGACCCTTTACCTACAATTAGCCCTAACTCA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT43N05, TM0178.
AP004546.1:10391-10410
TAGTTGTTAGTAAATTGGTACAAATTATCT10391CTCCTCAGGGTTCGAATCCTGACCCTTTACCTACAATTAGCCCTAACTCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:19810852-19810871
TAGTTGTTAGTAAATTAGTACAAATTATTC19810852CTCCTCAGGGTTCGAATCCTGACCCTTCACTTTCAATTACCCTTAGCTCA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:4331262-4331281
TTAGTTGTTAGTAACGTTAGTAAATTAGTC4331262CTCCTCAGGGTTCGAATCCTGAACCCTTCACCATTTACTCTCCCAAACTC
Lotus japonicus genomic DNA, chromosome 1, clone: LjB04J07, BM1105.
AP007808.2:104597-104616
TGAGTTAGGGCTAATTGTAGGTAAAGGGTC104597AGGATTCGAACCCTGAGGAGAGATAATTTGTACCAATTTACTAACAACTA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT10P24, TM1388.
AP008039.2:35918-35937
TGAGTTAGGGCTAATTGTAGGTAAAGGGTC35918AGGATTCGAACCCTGAGGAGAGATAATTTGTACCAATTTACTAACAACTA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:93214785-93214804
TGAGTTAGGGCTAATTGTAGGTAAAGGGTC93214785AGGATTCGAACCCTGAGGAGAGATAATTTGTACCAATTTACTAACAACTA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:5945867-5945886
TGAGCTAAGGGTAATTGCAGGTGAAGGGTC5945867AGGATTCGAACCCTGAGGAGAGATAATTTATATTACTTTACTAACAATTA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:44669434-44669453
GGGTTGGGTGAGATGAAGGGTGAAAGATCC44669434AGGATTCGAACCCTGAGGAGAGATTAATTTACTAACATCGCTAACAACTA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:42232426-42232445
AGAGTTAGGGAACATAAGAATTGGGTGGGC42232426AGGATTCGAACCCTGAGGAGAAATTAATTTCCTGACATTACTACAACTAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCCTCAGGGTTCGAATCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCTCAGGGTTCGAATCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCTCAGGGTTCGAATCCT&k=0&no_gap=0&offset=0&limit=50
0.119 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=AGGATTCGAACCCTGAGGAG&k=0&no_gap=0&offset=0&limit=46
0.123 | 0.004 | cgi_end;

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