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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:28:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Plectropomus leopardus DNA, chromosome 16, nearly complete sequence.
AP022715.1:27941017-27941035
CAGATCTTGAATTGAAGCTATAAAACACAC27941017CTCCTCAGTCAATTCAGTCATTGGTGTTGTTGCTGTAGCCTTACTTGTT
Triticum timopheevii genome assembly, chromosome: 7At.
OY997273.1:633504808-633504826
TCGACTCGACTTGAGCATGCGAGATGGAAA633504808CTCCTCAGTCAATTCAGTCTTCTACAAACACGAACACCATGGTCCTTCC
Chrysolina oricalcia genome assembly, chromosome: 17.
OX101825.2:44367312-44367330
CTGTGATTGCCTTGAAGTACTCATCTGCAT44367312CTCCTCAGTCAATTCAGTCATGTTTGAAATACTGTCTCTAGCTATTTCT
Saturnia pavonia genome assembly, chromosome: 11.
OX383905.1:766384-766402
TCAAGTGCGTTTTTTCCTGGCAAGGCCAGT766384CTCCTCAGTCAATTCAGTCAGCCTCTGTTAATTCTTGATCAAAATTAAT
Eilema griseolum genome assembly, chromosome: 11.
OY759240.1:10930967-10930985
TACTGTAATCAGCGTCACCGATGAAATGAA10930967CTCCTCAGTCAATTCAGTCTCTGTGAGAAAAAAACATTGCCAATTAGAT
Felis catus Senzu DNA, chromosome: X, American Shorthair breed.
AP023170.1:26776685-26776703
GACATTAAAGGAACAACATTTTGTTTAAGG26776685GACTGAATTGACTGAGGAGTTCATTTAAACTAGGTCTTTCCTTCTCTGG
Erpetoichthys calabaricus genome assembly, chromosome: 2.
LR536433.2:51842502-51842520
AATCACCAGCCAAAGGATGTATACCAGTTT51842502GACTGAATTGACTGAGGAGATGGAATAATAAGTAAGTCCATCTTTGCCA
JP 2007523636-A/224: CELL CYCLE GENES AND RELATED METHODS OF USING.
DJ335434.1:903-921
CCCTTGGGCTGGTAAGAAGGAGGGTTTGCA903GACTGAATTGACTGAGGAGCAGAAGAAGTATGCTCAGGAACATGCTGAG
Sequence 224 from patent US 7598084.
GP700745.1:903-921
CCCTTGGGCTGGTAAGAAGGAGGGTTTGCA903GACTGAATTGACTGAGGAGCAGAAGAAGTATGCTCAGGAACATGCTGAG
JP 2011097941-A/224: CELL CYCLE GENES AND RELATED METHODS OF USING.
HV339303.1:903-921
CCCTTGGGCTGGTAAGAAGGAGGGTTTGCA903GACTGAATTGACTGAGGAGCAGAAGAAGTATGCTCAGGAACATGCTGAG
GQ0047.B3_D22 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone GQ0047_D22 5', mRNA sequence.
DV971286.2:85-103
CCCTTGGGCTGGTAAGAAAGAGGGTTTGCA85GACTGAATTGACTGAGGAGCAGAAGAAGTATGCCCAGGAGCATGCTGAG
GQ02796.B3_E05 GQ099: Mixed spruce tissues Picea glauca cDNA clone GenomeQuebec_Id:GQ02796_E05 5', mRNA sequence.
DV998275.1:85-103
CCCTTGGGCTGGTAAGAAAGAGGGTTTGCA85GACTGAATTGACTGAGGAGCAGAAGAAGTATGCCCAGGAGCATGCTGAG
GQ0047.B3.r_D22 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone GQ0047_D22 5', mRNA sequence.
GE474439.1:85-103
CCCTTGGGCTGGTAAGAAAGAGGGTTTGCA85GACTGAATTGACTGAGGAGCAGAAGAAGTATGCCCAGGAGCATGCTGAG
Picea glauca clone GQ0047_D22 mRNA sequence.
BT100850.1:85-103
CCCTTGGGCTGGTAAGAAAGAGGGTTTGCA85GACTGAATTGACTGAGGAGCAGAAGAAGTATGCCCAGGAGCATGCTGAG
Clostera curtula genome assembly, chromosome: 1.
FR997795.1:9643148-9643166
GTATAACGATGTCATCTGCAAATCCAAGAT9643148GACTGAATTGACTGAGGAGACCTGAATTGCTGATGATGGTCTCAAGAAC
Allygus modestus genome assembly, chromosome: 4.
OY776115.1:23470883-23470901
ATAAAACCTATTTGTGCTGACCCATATTGC23470883GACTGAATTGACTGAGGAGATATTGGATCCCTCCAAGCCGTGCTGCTGG
Sepia lycidas genome assembly, chromosome: 13.
OZ010583.1:46444971-46444989
AAGGAGAAAATAGTCTTGTTTACTGTAACT46444971GACTGAATTGACTGAGGAGATATCTCACAAAATTTTGTTGTCCTGTAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCTCAGTCAATTCAGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCTCAGTCAATTCAGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.226 | 0.217 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCTCAGTCAATTCAGTC&k=0&no_gap=0&offset=0&limit=50
0.630 | 0.404 | search_minus_done; http://172.18.8.135:50400/match?q=GACTGAATTGACTGAGGAG&k=0&no_gap=0&offset=0&limit=45
0.638 | 0.008 | cgi_end;

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