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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:01:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 46738 from patent US 9029636.
HK955801.1:220-239
ACCCTCACCCCCACCCTCCTCTTCCACACC220CTCCTCCGCCTCAAAAACCACTCCAAAATCGCCCTCTCCCTCTTCCACTA
Glycine max clone GM_WBb0063P03, complete sequence.
AC235846.2:8077-8096
ACCCTCACCCCCACCCTCCTCTTCCACACC8077CTCCTCCGCCTCAAAAACCACTCCAAAATCGCCCTCTCCCTCTTCCACTA
Glycine max cultivar Williams 82 chromosome 2.
CP126427.1:51699203-51699222
ACCCTCACCCCCACCCTCCTCTTCCACACC51699203CTCCTCCGCCTCAAAAACCACTCCAAAATCGCCCTCTCCCTCTTCCACTA
Glycine max cultivar Williams 82 chromosome 8.
CP126433.1:23354765-23354784
CAGCTCCACAGCATCACCCTCACCCCCACC23354765CTCCTCCGCCTCAAAAACCACTCCAAGATCGCCCTCACCCTCTTCCACTG
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:2578876-2578895
CAGCTCCACAGCATCACCCTCACCCCCACC2578876CTCCTCCGCCTCAAAAACCACTCCAAGATCGCCCTCTCCCTCTTCCAGTG
Glycine max cultivar Williams 82 chromosome 14.
CP126439.1:3404293-3404312
CAGCTCCACAGCATCACCCTCACCCCCACC3404293CTCCTCCGCCTCAAAAACCACTCCAAGATCGCCCTCTCCCTCTTCCACTG
Pyrausta purpuralis genome assembly, chromosome: Z.
OZ001647.1:2782662-2782681
CATTGTAACAAGATTGTGTAAGGTTTGTAA2782662CTCCTCCGCCTCAAAAACCATACTAGAAACGGAGTTGGTACTCATTACGT
Pyrausta purpuralis genome assembly, chromosome: Z.
OZ001647.1:2786226-2786245
CATTGTAACAAGATTGTGTAAGGTTTGTAA2786226CTCCTCCGCCTCAAAAACCATACTAGAAACGGAGTTGGTACTCATTACGT
Sequence 105723 from patent US 9029636.
HL014787.1:275-294
CAGTGGAAGAGGGAGAGGGCGATCTTGGAG275TGGTTTTTGAGGCGGAGGAGGGTGGGGGAGGAGCTTCGAGACCAGTTCGA
Glycine max strain Williams 82 clone GM_WBb0002O19, complete sequence.
AC235173.1:87176-87195
TAGTGGAAGAGGGAGAGGGCGATTTTGGAG87176TGGTTTTTGAGGCGGAGGAGGGTGTGGAAGAGGAGGGTGGGGGTGAGGGT
Glycine max strain Williams 82 clone GM_WBb0025G03, complete sequence.
AC235227.1:78858-78877
CAGTGGAAGAGGGAGAGGGCGATCTTGGAG78858TGGTTTTTGAGGCGGAGGAGGGTGGGGGTGAGGGTGATGCTGTGGAGCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCTCCGCCTCAAAAACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCTCCGCCTCAAAAACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.193 | 0.185 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCTCCGCCTCAAAAACCA&k=0&no_gap=0&offset=0&limit=50
0.311 | 0.118 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTTTTTGAGGCGGAGGAG&k=0&no_gap=0&offset=0&limit=42
0.313 | 0.002 | cgi_end;

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