GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:15:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 1, clone: LjT37G03, TM0675.
AP007507.2:90708-90727
AAGCAATAATCATTGGAAAATCCGATGTTT90708CTCGGCTAAACTCAGATTTCTATTTGTTGTCTGTTCACTTTGTTTTCACC
Lotus japonicus genomic DNA, chromosome 1, clone: LjB70O07, BM1196.
AP007888.2:154571-154590
AAGCAATAATCATTGGAAAATCCGATGTTT154571CTCGGCTAAACTCAGATTTCTATTTGTTGTCTGTTCACTTTGTTTTCACC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:104003850-104003869
AAGCAATAATCATTGGAAAATCCGATGTTT104003850CTCGGCTAAACTCAGATTTCTATTTGTTGTCTGTTCACTTTGTTTTCACC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCGGCTAAACTCAGATTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCGGCTAAACTCAGATTTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CTCGGCTAAACTCAGATTTC&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=GAAATCTGAGTTTAGCCGAG&k=0&no_gap=0&offset=0&limit=47
0.133 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).