GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 08:27:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

NXNV_066_D01_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV_066_D01 5', mRNA sequence.
AW698105.1:46-64
TTCACACCCCAACTGGAAAGCACAGAAGGC46CTCTAGCGACCATTTATTCCGTTAACCGGCTCGTCCCGGGTTCGAGCCA
RTCA1_20_H12.b1_A029 Roots minus calcium Pinus taeda cDNA clone RTCA1_20_H12_A029 3', mRNA sequence.
DR054916.1:692-710
TGGCTCGAACCCGGGACGAGCCTGTTAACG692GAATAAATGGTCGCTAGAGGCCTTCTGTGCTTTCCAGTTGGGGTGTGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCTAGCGACCATTTATTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTAGCGACCATTTATTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTAGCGACCATTTATTC&k=0&no_gap=0&offset=0&limit=50
0.170 | 0.068 | search_minus_done; http://172.18.8.135:50400/match?q=GAATAAATGGTCGCTAGAG&k=0&no_gap=0&offset=0&limit=49
0.171 | 0.001 | cgi_end;

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