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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:46:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Prunus armeniaca SOC1 (SOC1) mRNA, complete cds.
FJ472817.1:466-487
TTGTGATGCTGAGGTTGCGCTCATAATATT466CTCTCCAAGGGGAAAGCTCTATGAATTTGCAAGTTCGAGCATGCAGACAACC
Prunus mume SOC1-like protein (SOC1) gene, complete cds.
JF806632.1:354-375
TTGTGATGCTGAGGTTGCGCTCATAATATT354CTCTCCAAGGGGAAAGCTCTATGAATTTGCAAGTTCGAGGTATTTATTTATA
Prunus x yedoensis SOC1-like protein (SOC1) gene, complete cds.
JF806636.1:147-168
CTGTGATGCCGAGGTTGCTCTCATAATATT147CTCTCCAAGGGGAAAGCTCTATGAATTTGCAAGTTCGAGGTATTTATTTATA
Prunus salicina cultivar royal zee SOC1 mRNA, complete cds.
JX524767.1:144-165
CTGTGATGCTGAGGTTGCTCTCATAATATT144CTCTCCAAGGGGAAAGCTCTATGAATTTGCAAGTTCGAGCATGCAGACAACC
Prunus armeniaca SOC1 (SOC1) gene, complete cds.
JX546224.1:546-567
TTGTGATGCTGAGGTTGCGCTCATAATATT546CTCTCCAAGGGGAAAGCTCTATGAATTTGCAAGTTCGAGGTATTTATTTATA
Prunus sibirica MADS-box protein SOC1-1 (SOC1) mRNA, complete cds.
OP244070.1:144-165
TTGTGATGCTGAGGTTGCGCTCATAATATT144CTCTCCAAGGGGAAAGCTCTATGAATTTGCAAGTTCGAGCATGCAGACAACC
Medicago lupulina genome assembly, chromosome: 6.
OY283144.1:49598860-49598881
TGGTACACCTTACATTTACCTCGATCCTAC49598860CTCTCCAAGGGGAAAGCTCTATATTCAGAAAAAATCATGTCCCTTGCTCCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCTCCAAGGGGAAAGCTCTAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTCCAAGGGGAAAGCTCTAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.203 | 0.195 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTCCAAGGGGAAAGCTCTAT&k=0&no_gap=0&offset=0&limit=50
0.300 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=ATAGAGCTTTCCCCTTGGAGAG&k=0&no_gap=0&offset=0&limit=43
0.300 | 0.000 | cgi_end;

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