GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 00:41:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Triticum monococcum genome assembly, chromosome: 1A.
OY737850.1:183074288-183074307
CCTTGCCTCTCCAAGGCCCAGCCTGCCGGC183074288CTCTCTCGTCTCCACCGAACGGGCCAAGGGTGAGCCACTGTTGCGCCCCC
Triticum monococcum genome assembly, chromosome: 1A.
OY737858.1:187117882-187117901
CCTTGCCTCTCCAAGGCCCAGCCTGCCGGC187117882CTCTCTCGTCTCCACCGAACGGGCCAAGGGTGAGCCACTGTTGCGCCCCC
Trifolium pratense DNA, clone:RCG01046.
DE246695.1:190-209
AGGAGAAGATGATGGCTGGGGAGGGGTCTG190GTTCGGTGGAGACGAGAGAGGCCGCGTTGATGGAGAGGGATTTGGCGGCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCTCTCGTCTCCACCGAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTCTCGTCTCCACCGAAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTCTCGTCTCCACCGAAC&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=GTTCGGTGGAGACGAGAGAG&k=0&no_gap=0&offset=0&limit=48
0.141 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).