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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 14:57:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sylvilagus floridanus genome assembly, chromosome: 3.
OX463225.1:48630978-48630997
GAGGAGCGAACCAGCAGATGGAAGATCACT48630978CTCTCTCTCAGGGCCAACACTGTGGCATACTGGTTCATGTCCTAGCTGTG
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:70185375-70185394
CGCCGGAGGAAGACATCATGGTGGATCGAT70185375CTCTCTCTCAGGGCCAACACCGCCTCGTACAGCAAGTAGGCTTTTGAGGT
Lotus japonicus cDNA clone:MWL058b11_r, 5' end.
AV409491.1:74-93
ACCTCAAAAGCCTACTTGCTGTACGAGGCG74GTGTTGGCCCTGAGAGAGAGATCGATCCACCATGATGTCTTCCTCCGGCG
LjNEST11f9r Lotus japonicus nodule library 5 and 7 week-old Lotus japonicus cDNA 5', mRNA sequence.
AW719896.1:68-87
ACCTCAAAAGCCTACTTGCTGTACGAGGCG68GTGTTGGCCCTGAGAGAGAGATCGATCCACCATGATGTCTTCCTCCGGCG
LjNEST43g8r Lotus japonicus nodule library 5 and 7 week-old Lotus japonicus cDNA 5', mRNA sequence.
BI418619.1:130-149
ACCTCAAAAGCCTACTTGCTGTACGAGGCG130GTGTTGGCCCTGAGAGAGAGATCGATCCACCATGATGTCTTCCTCCGGCG
Lotus japonicus cDNA, clone: LjFL2-010-AF06, 5' end, suspension-cultured cells treated with salicylic acid or methyljasmonate.
BW624656.1:79-98
ACCTCAAAAGCCTACTTGCTGTACGAGGCG79GTGTTGGCCCTGAGAGAGAGATCGATCCACCATGATGTCTTCCTCCGGCG
Lotus japonicus cDNA, clone: LjFL2-021-DG10, 5' end, suspension-cultured cells treated with salicylic acid or methyljasmonate.
BW628967.1:82-101
ACCTCAAAAGCCTACTTGCTGTACGAGGCG82GTGTTGGCCCTGAGAGAGAGATCGATCCACCATGATGTCTTCCTCCGGCG
Lotus japonicus cDNA, clone: LjFL3-075-BE03, 5'-end sequence.
FS342903.1:25-44
GGAGCCTACTTGCTGTACGAGGCG25GTGTTGGCCCTGAGAGAGAGATCGATCCACCATGATGTCTTCCTCCGGCG
Lotus japonicus genomic DNA, chromosome 3, clone: LjT06J16, TM0083.
AP004929.1:97217-97236
ACCTCAAAAGCCTACTTGCTGTACGAGGCG97217GTGTTGGCCCTGAGAGAGAGATCGATCCACCATGATGTCTTCCTCCGGCG
Purpureocillium takamizusanense strain PT3 chromosome 1.
CP086354.1:1606060-1606079
GTCACAGTACGCCTTGAGGTTCTGGTTGTT1606060GTGTTGGCCCTGAGAGAGAGAGAGAGAAACTGTGTTAACACAACATGCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCTCTCTCAGGGCCAACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTCTCTCAGGGCCAACAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.344 | 0.335 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTCTCTCAGGGCCAACAC&k=0&no_gap=0&offset=0&limit=50
0.558 | 0.214 | search_minus_done; http://172.18.8.135:50400/match?q=GTGTTGGCCCTGAGAGAGAG&k=0&no_gap=0&offset=0&limit=48
0.564 | 0.005 | cgi_end;

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