GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-19 02:14:13, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys kempi genome assembly, chromosome: X.
OU015373.1:82377000-82377017
TACTGCAATGGTTATAGCTTGAAGCATGTT82377000CTCTCTGCAATTCTCGCCTTTGATCCTTATACAAACCTGTGAAATAAT
Cucumis melo subsp. melo EST, clone PSI_12-E03-M13R.
AM721852.2:101-118
ATGTGTCCTCTCAGATTCATCCTCGTTTTC101CTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCT
EST11032943 MNFG2 library Cucumis melo cDNA clone BA19YD14FM1, mRNA sequence.
JG491230.1:101-118
ATGTGTCCTCTCAGATTCATCCTCGTTTTC101CTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCT
EST11038286 MNRP2 library Cucumis melo cDNA clone CA17YD08FM1, mRNA sequence.
JG496573.1:101-118
ATGTGTCCTCTCAGATTCATCCTCGTTTTC101CTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCT
EST11051610 VFTP2 library Cucumis melo cDNA clone HA5YA01FM1, mRNA sequence.
JG509897.1:93-110
ATGTGTCCTCTCAGATTCATCCTCGTTTTC93CTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCT
EST11052738 VFTP2 library Cucumis melo cDNA clone HA9YM21FM1, mRNA sequence.
JG511025.1:88-105
ATGTGTCCTCTCAGATTCATCCTCGTTTTC88CTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCT
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_17245, mRNA sequence.
JW935288.1:70-87
ATGTGTCCTCTCAGATTCATCCTCCTTTTC70CTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar Allsugar chromosome 4.
CP155012.1:18803317-18803334
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18803317CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar Charleston Gray chromosome 4.
CP155145.1:19129522-19129539
ATGTGTCCTCTCAGATTCATCCTCGTTTTC19129522CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar Calhoun Gray chromosome 4.
CP155156.1:19210384-19210401
ATGTGTCCTCTCAGATTCATCCTCGTTTTC19210384CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar PKR6 chromosome 4.
CP155167.1:19193302-19193319
ATGTGTCCTCTCAGATTCATCCTCGTTTTC19193302CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar Sugarlee chromosome 4.
CP155178.1:18745997-18746014
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18745997CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar ShiHongNo2 chromosome 4.
CP155189.1:18939873-18939890
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18939873CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar PI 288522 chromosome 4.
CP155200.1:18836932-18836949
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18836932CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar DaBanHongZiGua chromosome 4.
CP155211.1:18590018-18590035
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18590018CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar PI 381740 chromosome 4.
CP155222.1:18815073-18815090
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18815073CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar SanBaiGua chromosome 4.
CP155233.1:19569971-19569988
ATGTGTCCTCTCAGATTCATCCTCGTTTTC19569971CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar PI 254622 chromosome 4.
CP155244.1:18962464-18962481
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18962464CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus cultivar HeiShanRen chromosome 4.
CP155255.1:18803317-18803334
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18803317CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus amarus cultivar PI 296341-FR chromosome 4.
CP155266.1:18675171-18675188
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18675171CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus amarus cultivar PI 189225 chromosome 4.
CP155277.1:19207594-19207611
ATGTGTCCTCTCAGATTCATCCTCGTTTTC19207594CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus amarus cultivar RCAT 055816 chromosome 4.
CP155288.1:18965476-18965493
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18965476CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus amarus cultivar PI 271769 chromosome 4.
CP155299.1:18749574-18749591
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18749574CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus subsp. mucosospermus cultivar PI 595203 chromosome 4.
CP155310.1:19169785-19169802
ATGTGTCCTCTCAGATTCATCCTCGTTTTC19169785CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus amarus cultivar PI 482276 chromosome 4.
CP155321.1:18675311-18675328
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18675311CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Citrullus lanatus subsp. mucosospermus cultivar PI 532732 chromosome 4.
CP155332.1:18481384-18481401
ATGTGTCCTCTCAGATTCATCCTCGTTTTC18481384CTCTCTGCAATTCTCGCCGGATACATCGCCTGGAGATCCGCTTCTTCT
Cucumis melo genomic scaffold, anchoredscaffold00010.
LN681882.1:326924-326941
ATGTGTCCTCTCAGATTCATCCTCGTTTTC326924CTCTCTGCAATTCTCGCCGGATACTTCGCCTGGAGATCCGCTTCTTCT
Turneriella parva DSM 21527, complete genome.
CP002959.1:1311335-1311352
CGAGAAACTCGACGCACTGCGCAAGCTAAA1311335CTCTCTGCAATTCTCGCCACAGAACACCAAGATCAGCGTGTCAGCCAA
Pseudoalteromonas xiamenensis strain PSDB chromosome 1, complete sequence.
CP099917.1:1451207-1451224
CAAAATCGCTTATCCAAACAACGTCGCCAA1451207CTCTCTGCAATTCTCGCCAAACAACTTCAAAGCGCCTACATCAATGGT
Platycnemis pennipes genome assembly, chromosome: 10.
OW121856.1:108853090-108853107
CTCTCGTCCTCGCCAAGGAGGAGGGGGAGC108853090CTCTCTGCAATTCTCGCCAACTGTCGCAGTCTTTGAGACATTTAAGTG
Macrothele cretica genome assembly, chromosome: 6.
OZ207525.1:10789477-10789494
CGACATCCCTATTCCAATATTCCGCTATCC10789477CTCTCTGCAATTCTCGCCCAGAAATTTACTTGCATGCGCTCGAGCCCC
Macrothele cretica genome assembly, chromosome: 13.
OZ207532.1:13689828-13689845
ATTCCACTAATCCCCTATCTTTCTCTTTTT13689828CTCTCTGCAATTCTCGCCCAGAAATCCACTTGAGCCCCACCCATCTTC
Macrothele cretica genome assembly, chromosome: X11.
OZ207566.1:30058678-30058695
GAAGTCACCATTCCATTACTCTCATAATTA30058678CTCTCTGCAATTCTCGCCCAAAAATCCACTTACATGTGCGTGAGCCTC
Bombina variegata genome assembly, chromosome: 12.
OZ123726.1:129211547-129211564
TTTGACTTATGTTCTGTAAGTCTCTCTGGC129211547CTCTCTGCAATTCTCGCCAATTGTAGCCACTGTGGATCAATGATTAGA
Bombina variegata genome assembly, chromosome: 12.
OZ123738.1:132748005-132748022
TTTGACTTATGTTCTGTAAGTCTCTCTGGC132748005CTCTCTGCAATTCTCGCCAATTGTAGCCACTGTGGATCAATGATTAGA
Podarcis liolepis genome assembly, chromosome: 2.
OZ218099.1:120909373-120909390
GGGCGCCTCGCCCCCTTACCAGGGGCCGGT120909373CTCTCTGCAATTCTCGCCCACAAAAGAGGGAGGAAGAGGAAAGGACTT
Tuber melanosporum mRNA 5-prime sequence from clone SY0AAD3YG05 (SY0AAD3YG05FM1).
FP452754.1:630-647
TCGCGAGATACGGAAGGAGGAGTTACTTAG630GGCGAGAATTGCAGAGAGGGAGGAGAAGTTGCAGCAACATC
Tuber melanosporum mRNA 5-prime sequence from clone SY0AAC35YB21 (SY0AAC35YB21FM1).
FP462549.1:599-616
TCGCGAGATACGGAAGGAGGAGTTACTTAG599GGCGAGAATTGCAGAGAGGGAGGAGAGGTTGCAGCAACATCGGGACAA
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:25400754-25400771
AGAAGAAGCGGATCTCCAGGCGAAGTATCC25400754GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Citrullus colocynthis cultivar PI 537300 chromosome 4.
CP155343.1:22924686-22924703
AGAAGAAGCGGATCTCCAGGCGATGTATCC22924686GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Citrullus colocynthis cultivar PI 525081 chromosome 4.
CP155354.1:22686942-22686959
AGAAGAAGCGGATCTCCAGGCGATGTATCC22686942GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Citrullus naudinianus cultivar PI 596694M chromosome 4.
CP155365.1:19644628-19644645
AGAAGAAGCGGATCTCCAGGCGATGTATCC19644628GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Citrullus colocynthis cultivar PI 652554 chromosome 4.
CP155376.1:21027896-21027913
AGAAGAAGCGGATCTCCAGGCGATGTATCC21027896GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Citrullus colocynthis cultivar PI 632755 chromosome 4.
CP155387.1:22708712-22708729
AGAAGAAGCGGATCTCCAGGCGATGTATCC22708712GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Citrullus rehmii cultivar PI 670011 chromosome 4.
CP155398.1:24845185-24845202
AGAAGAAGCGGATCTCCAGGCGATGTATCC24845185GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Citrullus ecirrhosus cultivar PI 673135 chromosome 4.
CP155409.1:26227193-26227210
AGAAGAAGCGGATCTCCAGGCGATGTATCC26227193GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Cucumis melo genomic chromosome, chr_8.
LN713262.1:24646660-24646677
AGAAGAAGCGGATCTCCAGGCGAAGTATCC24646660GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Medicago lupulina genome assembly, chromosome: 6.
OY283144.1:15583191-15583208
GACGGAATAACGACGGCGATTGCAGTGACC15583191GGCGAGAATTGCAGAGAGAGCTTCGGTTGCTGGCGGTGAGAGATGAGA
Draba incana genome assembly, chromosome: 12.
OY755213.1:29037117-29037134
TCAGATTCACGCGGCGGAGACGGTGAAAAT29037117GGCGAGAATTGCAGAGAGTGATGAGGAGGAGGAAGAGGAATCAGATTC
Citrullus colocynthis genome assembly, chromosome: 4.
OZ021738.1:21042813-21042830
AGAAGAAGCGGATCTCCAGGCGATGTATCC21042813GGCGAGAATTGCAGAGAGGAAAACGAGGATGAATCTGAGAGGACACAT
Arabis hirsuta genome assembly, chromosome: 4.
OZ053301.1:39240163-39240180
CTGTTTTCACGCGGCGGAAACAAGGAAAAT39240163GGCGAGAATTGCAGAGAGTGATGAGGAGGAGGAAGAGGAATCAGATAT
Arabis hirsuta genome assembly, chromosome: 9.
OZ053306.1:28613050-28613067
CTGTTTTCACGCGGCGGAAACAGGGAAAAT28613050GGCGAGAATTGCAGAGAGCGAGGAGCAGGAGGAAGAGGAATCAGATAT
Ranunculus sceleratus genome assembly, chromosome: 4.
OZ205666.1:192649124-192649141
ACAGTAGAGGGATAGTAGGAGGAAGAGGAT192649124GGCGAGAATTGCAGAGAGCGCCATTAGAGAAAATTGGTTAGGTGGGAA
Ranunculus sceleratus genome assembly, chromosome: 7.
OZ205669.1:161818940-161818957
ACAGTAGAGGGATAGTAGGAGGAAGAGGAT161818940GGCGAGAATTGCAGAGAGCGCCATTAGAGAAAATTGTGTAGGTGGGAA
Stegodyphus lineatus isolate Slin_Negev_A chromosome 9.
CP160560.1:101455079-101455096
TAGCATAAAATGTTTAAATACTCAGTATTA101455079GGCGAGAATTGCAGAGAGAGGGATGAAATCACTATCTTGTAGCGTGAG
Trichobilharzia szidati genome assembly, chromosome: 2.
OX235272.1:53308171-53308188
ATATAGTAACTGGAGATGTAATTAATTACC53308171GGCGAGAATTGCAGAGAGTGACCACTAATTTTGGTTTCCAGTAGTCAA
Chrysolina americana genome assembly, chromosome: 4.
OY293413.1:83223818-83223835
GTGGTGGCTGCTGCCCAACTCTGCCCGGTG83223818GGCGAGAATTGCAGAGAGAATATTCTAACCTCTGGTTTTATCGTTCTG
Drosophila limbata genome assembly, chromosome: X.
OZ001351.1:18175810-18175827
AAATGAGAGATAGAAAAAAAATAAAAATTG18175810GGCGAGAATTGCAGAGAGAGAGAAACGGATGTAGGAAGTTCGTGGCGA
Athalia cordata genome assembly, chromosome: 4.
OZ010628.1:425921-425938
TCCCAATATTTGCACCTGTAATCGCGTAAT425921GGCGAGAATTGCAGAGAGGGGAACCTCTCAAGGTAAGCACGATGGAGG
Perithous albicinctus genome assembly, chromosome: 5.
OZ024692.1:18170160-18170177
GGCTATTATGCAGGTGCGAGCAACAGTCAG18170160GGCGAGAATTGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCAACG
Chrysolina graminis genome assembly, chromosome: 4.
OZ078249.1:18764717-18764734
GTGGTGGCTGCCGCCCAACTTTGCCCGGTA18764717GGCGAGAATTGCAGAGAGAATATTCTAACCTCTGGTTTTATCGTTCTG
Caenorhabditis angaria genome assembly, chromosome: X.
OZ172642.1:854316-854333
GTCTTCTGTTCAGCACATGTTTCGATCAGT854316GGCGAGAATTGCAGAGAGGTATGGAGCAGATGTGAAGCAGAGCCGCGG
Phyllidia flava genome assembly, chromosome: 5.
OZ184101.1:750655-750672
TTTTTTTTTGGGGGGAAGGGGGGGGGGGGG750655GGCGAGAATTGCAGAGAGAACGTTATTTTTGTTTTGTTCGTCTTTATT
Sepia officinalis genome assembly, chromosome: 33.
OZ199173.1:10250645-10250662
AGTCCTGAAAATGAACACAGTTTTGTCTGT10250645GGCGAGAATTGCAGAGAGGAAATGAAGGTGGTTTTCCGGTGTCACCAT
Anilocra frontalis genome assembly, chromosome: 8.
OZ209262.1:777834671-777834688
GTTGAAAAAAAAAGAATTCCACGAAAAGAT777834671GGCGAGAATTGCAGAGAGCTTTCTCTTGTCTACTGTCAACAGGCATCA
Podarcis filfolensis genome assembly, chromosome: 2.
OZ185436.1:6353191-6353208
AAGTCCTTTCCTCTTCCTCCCTCTTTTGTG6353191GGCGAGAATTGCAGAGAGACCGGCCCTTTTCCCCCGTTGTTGCTGCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCTCTGCAATTCTCGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTCTGCAATTCTCGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.646 | 0.637 | search_plus_done; http://172.18.8.135:50800/match?q=CTCTCTGCAATTCTCGCC&k=0&no_gap=0&offset=0&limit=50
0.916 | 0.271 | search_minus_done; http://172.18.8.135:50800/match?q=GGCGAGAATTGCAGAGAG&k=0&no_gap=0&offset=0&limit=14
0.937 | 0.020 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).