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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:36:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Homo sapiens BAC clone RP11-302C22 from 7, complete sequence.
AC006992.2:119438-119455
TTAATGTTCTTGCGTTTAGTATTTATCAGC119438CTCTCTTTCCCCATTAGAATGCAGGACCCACATGGAGATTCTTCTACT
Homo sapiens chromosome unknown clone VMRC59-101N24, complete sequence.
AC279607.1:16111-16128
TTAATGTTCTTGCGTTTAGTATTTATCAGC16111CTCTCTTTCCCCATTAGAATGCAGGACCCACATGGAGATTCTTCTACT
Sciurus carolinensis genome assembly, chromosome: 3.
LR738592.1:16310299-16310316
TGGAACCTGCCTGAGCCAAGAGCACCCATG16310299CTCTCTTTCCCCATTAGACTTCAATTAGGAAACACAAATTCAAAATAA
Sciurus vulgaris genome assembly, chromosome: 3.
LR738613.1:16927141-16927158
TGGAACCTGCCTGAGCCAAGAGCACCCATA16927141CTCTCTTTCCCCATTAGACTTCAATTAGGAAACACAAATTCAAAATAA
Chionomys nivalis genome assembly, chromosome: 5.
OX465453.1:40359160-40359177
TTTCTATTATCTAATTCGTAATTGTTTATA40359160CTCTCTTTCCCCATTAGAGTGTGAATGATCCTCAGCAAGCTTCATACA
Micromys minutus genome assembly, chromosome: 3.
OZ004783.1:40048394-40048411
TGATCATATAAGACCCTGAACTTCTTTTTT40048394CTCTCTTTCCCCATTAGAACATATAACTTCTGTGGTAATTACCCCACC
Sarcophilus harrisii genome assembly, chromosome: 1.
LR735554.1:654195132-654195149
TGTATGTATACAATTTTTTTTTTATGTTGT654195132CTCTCTTTCCCCATTAGAAATTGACTTCCTCAAGCAATTTGGAACTAT
Lutra lutra genome assembly, chromosome: 4.
LR738406.1:68751557-68751574
TGGCGCCCCGGGGAAATTTGTTCTTATGCA68751557CTCTCTTTCCCCATTAGAGGCCTCTTAAATTCCTTGAGCTACGTGGCA
Meles meles genome assembly, chromosome: 1.
OV277441.1:88031286-88031303
TGGCGCCCCGGGGATATTTGTTCTTATGCA88031286CTCTCTTTCCCCATTAGAGGCCTCTTGAATTCCTTGAGCTACGTGGCA
Meles meles genome assembly, chromosome: 3.
OV277443.1:120005750-120005767
TGTCTATTTGTCAGATTGTTGGTTTAATGG120005750CTCTCTTTCCCCATTAGAATATAAGCGCATTGGGAGTGAATTCTGGGT
Sylvilagus floridanus genome assembly, chromosome: 15.
OX463237.1:36892639-36892656
CCAAAAAACAGCTATGCACTAAAAAGAATC36892639CTCTCTTTCCCCATTAGAAGGTCAGATTAAGGCTCCACCAGAATCACC
Martes martes genome assembly, chromosome: 4.
OY734066.1:67109545-67109562
TGGCGCCCCGGGGATATTTGTTCTTATGCA67109545CTCTCTTTCCCCATTAGAGGCCTCTTAAATTCCTTGAGCTACGTGGCA
Danio rerio strain T5D chromosome 15.
CP068749.1:39497712-39497729
TGTTTAAAAATGTGTTGATTTTTATTCTCC39497712CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Danio rerio strain Tubingen chromosome 15.
CP137028.1:42477686-42477703
TGTTTAAAAATGTGTTGATTTTTATTCTCC42477686CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Zebrafish DNA sequence from clone CH73-384D3.
CU695212.10:75409-75426
TGTTTAAAAATGTGTTGATTTTTATTCTCC75409CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Danio rerio genome assembly, chromosome: 15.
LR812052.1:40174423-40174440
TGTTTAAAAATGTGTTGATTTTTATTCTCC40174423CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Danio rerio genome assembly, chromosome: 15.
LR812077.1:39574361-39574378
TGTTTAAAAATGTGTTGATTTTTATTCTCC39574361CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Danio rerio strain Cooch Behar (CB) genome assembly, chromosome: 15.
LR812558.1:38850798-38850815
TGTTTAAAAATGTGTTGATTTTTATTCTCC38850798CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Danio rerio strain Nadia (NA) genome assembly, chromosome: 15.
LR812583.1:39015734-39015751
TGTTTAAAAATGTGTTGATTCTTATTCTCC39015734CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Danio rerio genome assembly, chromosome: 15.
LR812608.1:37197534-37197551
TGTTTAAAAATGTGTTGATTTTTATTCTCC37197534CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: Z.
OU383776.1:28525602-28525619
CTTACTCTAGTCCTGCCTCTTCCCATTACT28525602CTCTCTTTCCCCATTAGACTAATTATTTCATGTATTTATTTCATGTAC
Solea senegalensis genome assembly, chromosome: A.
OW185632.1:17017865-17017882
TAACTGTACTGAATCATTGTTGCCTGATTT17017865CTCTCTTTCCCCATTAGATATTGTTGAGTTACAGTTAAAGAATATGTT
Danio rerio genome assembly, chromosome: 15.
OX063304.1:42001611-42001628
TGTTTAAAAATGTGTTGATTTTTATTCTCC42001611CTCTCTTTCCCCATTAGACTGCACTTGACCATACAAAAAAATCAGAAA
Phalacrocorax aristotelis genome assembly, chromosome: 4.
OX451225.1:80569290-80569307
TAGACACACGTTCTGCAGAAGTGGTTATTC80569290CTCTCTTTCCCCATTAGAAGTCAAGATTTCCCATTTTCCTCAACATTT
Podarcis cretensis genome assembly, chromosome: 16.
OX638165.1:34766858-34766875
ATGCCACCCCAACAGTTTCTCTCTCTCTTG34766858CTCTCTTTCCCCATTAGATACATTATTGATTCCCCTTTGTTTAGCCCT
JP 2014500723-A/191603: Polycomb-Associated Non-Coding RNAs.
LF384100.1:609079-609096
TTAATGTTCTTGCGTTTAGTATTTATCAGC609079CTCTCTTTCCCCATTAGAATGCAGGACCCACATGGAGATTCTTCTACT
JP 2018138019-A/191603: Polycomb-Associated Non-Coding RNAs.
MA619677.1:609079-609096
TTAATGTTCTTGCGTTTAGTATTTATCAGC609079CTCTCTTTCCCCATTAGAATGCAGGACCCACATGGAGATTCTTCTACT
Sequence 191603 from patent US 10119144.
MM412444.1:609079-609096
TTAATGTTCTTGCGTTTAGTATTTATCAGC609079CTCTCTTTCCCCATTAGAATGCAGGACCCACATGGAGATTCTTCTACT
TSA: Ctenomys sociabilis 339726.Ctso mRNA sequence.
JU529691.1:1076-1093
TCACACCCCCACACTTATCCTCTGCTCCCT1076CTCTCTTTCCCCATTAGAATTTATCATTTGTGTCAACTTTACTAACAT
Macaca fuscata fuscata DNA, clone: MSB2-080E04_R, genomic survey sequence.
AG661021.1:482-499
AAAGGGAGTTGGAGGGTTACCAAAACCTTT482CTCTCTTTCCCCATTAGACACTGCCTGTGTAGAGAGAGGTGTGTGATA
HS_2106_A2_G11_T7C CIT Approved Human Genomic Sperm Library D Homo sapiens genomic clone Plate=2106 Col=22 Row=M, genomic survey sequence.
AQ711937.1:63-80
CTCCAAACATTGAAAGCCCTTAGAAATCTG63CTCTCTTTCCCCATTAGATTTTGAGTGTGCGTGTGTTTATTATTTTGG
13-L112238-1033-228-I04-pIfw IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-228-I04 5', genomic survey sequence.
JY411818.1:394-411
AGTGAGAATTTGAGTGATACTAGCTTTCCC394CTCTCTTTCCCCATTAGAGAGTAAGTTGAAGCTTCATCTTTTTGCACA
Homo sapiens chromosome 7 clone RP11-654I12, WORKING DRAFT SEQUENCE, 55 unordered pieces.
AC079619.3:117313-117330
TTAATGTTCTTGCGTTTAGTATTTATCAGC117313CTCTCTTTCCCCATTAGAATGCAGGACCCACATGGAGATTCTTCTACT
Rattus norvegicus clone CH230-7G20, WORKING DRAFT SEQUENCE.
AC133246.3:234372-234389
TATGGCCAAATTATTTCAAGTTAAAAGTTG234372CTCTCTTTCCCCATTAGATTGTAAACAACTGTCATTGAACGACAATGT
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-48O17.
FP565217.2:156719-156736
CCCTTGATGTTAACAGGTGCAGTTTGTGGC156719CTCTCTTTCCCCATTAGATGTTGAAGGGCCTTCACTATCACCCTTACT
Citrus reshni microsatellite DNA, locus mCrCIR02D04.
FR677564.1:90-107
TTAGCATTGATGTTGCTACCATTAACTAGT90CTCTCTTTCCCCATTAGATCTGGCTTCCTCATTGATAAGATACTTTGG
Citrus reshni microsatellite DNA, locus mCrCIR03D12.
FR677577.1:90-107
TTAGCATTGATGTTGCTACCATTAACTAGT90CTCTCTTTCCCCATTAGATCTGGCTTCCTCATTGATAAGATACTTTGG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:43495134-43495151
AGTGAGGATTTGAGTGATACTAGGTTTCCC43495134CTCTCTTTCCCCATTAGAGAGTAAGTTGAATCTTCATCCTTTTCCACA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392553.1:29236028-29236045
AGTGAGGATTTGAGTGATACAAGTTTTCCC29236028CTCTCTTTCCCCATTAGAGAGTAAGTTGAAGCTTCACCCTTTTGCACA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392553.1:41009414-41009431
AGTGAGGATTTGAGTGATACTAGTTTTCCC41009414CTCTCTTTCCCCATTAGAGAGTAAGTTGAAGCTTCACCTTTTTGCACA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:26635667-26635684
AGTGAGAATTTGAGTGATACTAGCTTTCCC26635667CTCTCTTTCCCCATTAGAGAGTAAGTTGAAGCTTCATCTTTTTGCACA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:42783842-42783859
AGTGAGGATTTGAGTGATACTAGGTTTCCC42783842CTCTCTTTCCCCATTAGAGAGTAAGTTGAATCTTCATCCTTTTCCACA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 3.
OX392558.1:26591496-26591513
AGTGAGGATTTGAGTGATACTAGTTTTCCC26591496CTCTCTTTCCCCATTAGAGAGTAAGTTGAAGCTTCACCTTTTTGCACA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392562.1:29128662-29128679
AGTGAGGATTTGAGTGATACTAGTTTTCCC29128662CTCTCTTTCCCCATTAGAGAGTTAGTTGAAGCTTCACCTTTTTGCAAC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392563.1:11236072-11236089
AGTGAGAATTTGAGTGATACTAGTTTTCCC11236072CTCTCTTTCCCCATTAGAGAGTAAGTTGAAGCTTCATCTTTTTGCACA
Citrus sinensis genome assembly, chromosome: 8.
OY754325.1:455523-455540
TTAGCATTGATGTTGCTACCATTAACTAGT455523CTCTCTTTCCCCATTAGATCTGGCTTCCTCATTGATAAGATACTTTGG
Viola odorata genome assembly, chromosome: 9.
OY829545.1:2856021-2856038
CAATGCCAATTCCCAAATCTCTACTGCTTG2856021CTCTCTTTCCCCATTAGACCATGCCAGTCAACCAGCGCAAATGCAGGT
Leishmania donovani strain MHOM/IN/1983/AG83 isolate early passage chromosome 35, partial sequence.
CP018603.1:1007619-1007636
ACGCGCATAGCACGACGTCGCTTCGTCCCT1007619CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania donovani strain MHOM/IN/1983/AG83 isolate late passage chromosome 35, partial sequence.
CP019544.1:1009554-1009571
ACGCGCATAGCACGACGTCGCTTCGTCCCT1009554CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania donovani strain pasteur chromosome 35, complete sequence.
CP022650.1:958576-958593
ACGCGCATAGCACGACGTCGCTTCGTCCCT958576CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania infantum strain TR01 isolate Lin_TR01 chromosome 35, complete sequence.
CP027835.1:1001420-1001437
ACGCGCATAGCACGACGTCGCTTCGTCCCT1001420CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania donovani strain LdCL chromosome LdCL_35, complete sequence.
CP029534.1:946614-946631
ACGCGCATAGCACGACGTCGCTTCGTCCCT946614CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania chagasi strain MHOM/HD/2017/M32502/Amapala isolate M32502 chromosome 35.
CP048164.1:999456-999473
ACGCGCATAGCACGACGTCGCTTCGTCCCT999456CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania chagasi strain MCER/BR/1981/M6445/Salvaterra isolate M6445 chromosome 35.
CP048200.1:999397-999414
ACGCGCATAGCACGACGTCGCTTCGTCCCT999397CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Macrobrachium nipponense isolate FS-2020 chromosome 30.
CP062009.1:18142070-18142087
AGAAACAAATTAAAGCCATTTTGCTAATTC18142070CTCTCTTTCCCCATTAGAAAATAGTACAACCCGTGAATTTCAAAATTC
Leishmania major breed Culture 1 isolate JRCGR_LM-01 chromosome 35.
CP086058.1:1004904-1004921
GCGCATCACACGACGTCGCTTCTTCCCTCT1004904CTCTCTTTCCCCATTAGAATCGCTTCGTTGAGAAGTAGCGGAAGGCTC
Leishmania major strain Friedlin complete genome, chromosome 35.
FR796431.1:1004918-1004935
GCGCATCACACGACGTCGCTTCTTCCCTCT1004918CTCTCTTTCCCCATTAGAATCGCTTCGTTGAGAAGTAGCGGAAGGCTC
Leishmania infantum JPCM5 genome chromosome 35.
FR796467.1:999442-999459
ACGCGCATAGCACGACGTCGCTTCGTCCCT999442CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania donovani BPK282A1 complete genome, chromosome 35.
FR799622.2:1015641-1015658
ACGCGCATAGCACGACGTCGCTTCGTCCCT1015641CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania donovani genome assembly, chromosome: 35.
LR812655.1:912795-912812
ACGCGCATAGCACGACGTCGCTTCGTCCCT912795CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania infantum genome assembly, chromosome: 35.
LR812968.1:930786-930803
ACGCGCATAGCACGACGTCGCTTCGTCCCT930786CTCTCTTTCCCCATTAGAATCGCTCCATTGAGAAGTAGCGAAAGGTGC
Leishmania major strain Friedlin genome assembly, chromosome: 35.
OU755569.1:923988-924005
GCGCATCACACGACGTCGCTTCTTCCCTCT923988CTCTCTTTCCCCATTAGAATCGCTTCGTTGAGAAGTAGCGGAAGGCTC
Athalia rosae genome assembly, chromosome: 6.
OU795005.1:8035765-8035782
CGCTGCAGAAACATCCACATCTACTAAAAT8035765CTCTCTTTCCCCATTAGATAATGTAAGTTTCACGGTCGCCATTTTTGT
Taphrorychus bicolor genome assembly, chromosome: 2.
OX638298.1:16548874-16548891
AGGTTGGCCATAAAATTCACTAATTTATAG16548874CTCTCTTTCCCCATTAGAAAATTATTGACTTGTTGGGTCCTCGTTAGG
Aspidapion aeneum genome assembly, chromosome: 11.
OY755048.1:461849-461866
CCAAACAAAAAATATATTTCTACCCCCACC461849CTCTCTTTCCCCATTAGAAAAATGAGTTTCCAAACAACTCACGATCAG
Dyspetes luteomarginatus genome assembly, chromosome: 5.
OY769907.1:7140353-7140370
TTCTGTCTCTCTCTCTCTCTCTCTCGCCCG7140353CTCTCTTTCCCCATTAGACGTAATATGCAATTTTTTTTTTGCCGTATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCTCTTTCCCCATTAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTCTTTCCCCATTAGA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.468 | 0.460 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTCTTTCCCCATTAGA&k=0&no_gap=0&offset=0&limit=50
0.612 | 0.143 | search_minus_done; http://172.18.8.135:50400/match?q=TCTAATGGGGAAAGAGAG&k=0&no_gap=0&offset=0&limit=0
0.612 | 0.000 | cgi_end;

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