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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:09:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdlv3_4035k12.y1 Mdlv3 Malus domestica cDNA clone Mdlv3_4035k12 5' similar to TR:Q9SYJ1 Q9SYJ1 PUTATIVE NIFU-LIKE METALLOCLUSTER ASSEMBLY FACTOR, mRNA sequence.
CV883275.1:145-164
CACTGTTTCACCGCTAAAACGCCCATCTTT145CTGAAAACCGCCATTAGAGCTTCGAACCCAAGGGCCGCCGCCGAGTCTTC
Mdas9007B11.g1 Apple_EST_Mdas Malus domestica cDNA similar to ref|NP_567219.1| NifU-related metallocluster assembly factor [Arabidopsis thaliana] gb|AAK62607.1| AT4g01940/T7B11_20 [Arabidopsis thalian
DR996697.1:128-147
CACTGTTTCACCGCTAAAACGCCCATCTTT128CTGAAAACCGCCATTAGAGCTTCGAACCCAAGGGCCGCCGCCGAGTCTTC
Mdfwj2081O17.g1 Apple_EST_Mdfwj Malus domestica cDNA 5' similar to ref|NP_567219.1| NifU-related metallocluster assembly factor [Arabidopsis thaliana] gb|AAK62607.1| AT4g01940/T7B11_20 [Arabidopsis th
GO543425.1:108-127
CACTGTTTCACCGCTAATTCTCCCATCTTT108CTGAAAACCGCCATTAGAGCTTCGAACCCAAGCGCCGCCGCCGAGTCCTC
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141969.1:33223093-33223112
CACTGTTTCACCTCTAAAACGCCCATCTTT33223093CTGAAAACCGCCATTAGAGCGTCGAACCCAAGCGCCGCCGCCGAGTCCTC
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141986.1:34083970-34083989
CACTGTTTCACCGCTAAAACGCCCATCTTT34083970CTGAAAACCGCCATTAGAGCTTCGAACCCAAGGGCCGCCGCCGAGTCTTC
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143374.1:33579337-33579356
CACTGTTTCACCGCTAAAACGCCCATCTTT33579337CTGAAAACCGCCATTAGAGCTTCGAACCCAAGGGCCGCCGCCGAGTCTTC
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:31174952-31174971
CACTGTTTCACCTCTAAAACGCCCATTTTT31174952CTGAAAACCGCCATTAGAGCTTCGAACCCAAGCGCCGCCGCCGAGTCTTC
Malus sylvestris genome assembly, chromosome: 17.
OU696519.1:33178709-33178728
CACTGTTTCACCTCTAAAACGCCCATCTTT33178709CTGAAAACCGCCATTAGAGCGTCGAACCCAAGCGCCGCCGCCGAGTCCTC
Malus domestica genome assembly, chromosome: 17.
OU696693.1:33436130-33436149
CACTGTTTCACCGCTAAAACGCCCATCTTT33436130CTGAAAACCGCCATTAGAGCTTCGAACCCAAGGGCCGCCGCCGAGTCTTC
Malus domestica genome assembly, chromosome: 17.
OU744969.1:33172931-33172950
CACTGTTTCACCGCTAAAACGCCCATCTTT33172931CTGAAAACCGCCATTAGAGCTTCGAACCCAAGTGCCGCCGCCGAGTCTTC
Malus domestica genome assembly, chromosome: 17.
OU745007.1:33325387-33325406
CACTGTTTCACCGCTAAAACGCCCATCTTT33325387CTGAAAACCGCCATTAGAGCTTCGAACCCAAGGGCCGCCGCCGAGTCTTC
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:38947429-38947448
CACTGTTTCACCTCTAAAACGCCCATCTTT38947429CTGAAAACCGCCATTAGAGCTTCGAACCCAAGCGCCGCCTCCGAGTCTTC
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141926.1:625877-625896
GAGGACTCGGCGGCGGCGCTTGGGTTCGAC625877GCTCTAATGGCGGTTTTCAGAAAGATGGGCGTTTTAGAGGTGAAACAGTG
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141943.1:687951-687970
GAAGACTCGGCGGCGGCCCTTGGGTTCGAA687951GCTCTAATGGCGGTTTTCAGAAAGATGGGCGTTTTAGCGGTGAAACAGTG
Malus x robusta genome assembly, chromosome: 11.
OY720335.1:691107-691126
GAGGACTCGGCGGCGGCGCTTGGGTTCGAC691107GCTCTAATGGCGGTTTTCAGAAAGATGGGCGTTTTAGAGGTGAAACAGTG
Bembecia ichneumoniformis genome assembly, chromosome: 4.
OU342523.1:8816635-8816654
CAAAAGTAACAAAACAAATTAATTTATCGT8816635GCTCTAATGGCGGTTTTCAGTAAAATACTTTGTAGGGTTCATCATGATTC
Dicrocoelium dendriticum genome assembly, chromosome: 1.
OX104063.1:211498623-211498642
CTTTCAGACCAATGTGTATCAGGCGACGTA211498623GCTCTAATGGCGGTTTTCAGTTAGTAATGAAATCGTTCGACGACACCATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGAAAACCGCCATTAGAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGAAAACCGCCATTAGAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.375 | 0.367 | search_plus_done; http://172.18.8.135:50400/match?q=CTGAAAACCGCCATTAGAGC&k=0&no_gap=0&offset=0&limit=50
0.497 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=GCTCTAATGGCGGTTTTCAG&k=0&no_gap=0&offset=0&limit=38
0.501 | 0.004 | cgi_end;

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