GGGenome | Results

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2025-04-12 15:03:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Ovis canadensis canadensis isolate 43U chromosome 21 sequence.
CP011906.1:2978101-2978119

CTACTGGTTACTTTCTGTTAATGGGGACAG2978101CTGAATACATGTAAGGGCTGGACTATCCAGGCACAAAGAGCAGTTGTMA

Eudonia mercurella genome assembly, chromosome: 29.
OY720051.1:9822954-9822972

AATGTGGACATTCACTGCCAAAACTTGCAG9822954CTGAATACATGTAAGGGCTGTTTTTTCAATTCTCATATAAAAATTAAAC

Capricornis sumatraensis isolate serow.1 chromosome 8.
CP135634.1:46909562-46909580

TTGAAACTGCTGTTTGTGCCTGGATAGTCC46909562AGCCCTTACATGTATTCAGCTGTCCCCATTAATAGAAAGTAACCAGTAG

Tridacna gigas genome assembly, chromosome: 9.
OX244036.2:16032063-16032081

TTATTGCTGACAATTAATTCATGACTATAA16032063AGCCCTTACATGTATTCAGCTTTTGCAAGTGGTACAAAGGAGAAATATT

Lamellibrachia columna genome assembly, chromosome: 14.
OY759274.1:32358306-32358324

TACATCATAATGACAAGCAAAGATTGCAAT32358306AGCCCTTACATGTATTCAGGATGACCAGTAACCTGTCAGGATGACCAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=CTGAATACATGTAAGGGCT&k=0&no_gap=0&offset=0&limit=50
0.159 | 0.038 | search_minus_done; http://172.18.8.135:50400/match?q=AGCCCTTACATGTATTCAG&k=0&no_gap=0&offset=0&limit=48
0.161 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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