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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:44:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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UCRCS01_02db10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02db10, mRNA sequence.
CB291368.1:150-169
TCTCTTGACTTGGATCAGACTTGATCAGAC150CTGACCCCAGCAGTTCAAGTACATGACTCGGCGGAGAGACTCGTCCGTTT
UCRCS01_05df03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05df03, mRNA sequence.
CB293308.1:187-206
TCTCTTGACTTGGATCAGACTTGATCAGAC187CTGACCCCAGCAGTTCAAGTACATGACTCGGCGGAGAGACTCGTCCGTTT
EST 780 Green Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone ba003o21 3', mRNA sequence.
CB819788.1:244-263
GGAAAATTCCAATCGCCGGCGATCTCAGCC244CTGACCCCAGCAGTTCAAGTACATGACTTTTTGGATAGACTCGTCGGACT
UCRCS04_0001E08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E08, mRNA sequence.
CN181643.1:177-196
TCTCTTGACTTGGATCAGACTTGATCAGAC177CTGACCCCAGCAGTTCAAGTACATGACTCGGCGGAGAGACTCGTCCGTTT
EST 7040 Green Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone bga011j01p 3', mRNA sequence.
CV045333.1:265-284
GGAAAATTCCAATCGCCGGCGATCTCAGCC265CTGACCCCAGCAGTTCAAGTACATGACTTTTTGGATAGACTCGTCGGACT
Citrus unshiu mRNA, clone: RGP0175, 5'-end sequence, expressed in root.
DC896431.1:202-221
TCTCTTGACTTGGATCAGACTTGATCAGAC202CTGACCCCAGCAGTTCAAGTACATGACTCGGCGGAGAGACTCGTCCGTTT
PPL-08-_T3__A08 Prunus persica L. leaf tissue, Plum Pox Virus infected Prunus persica cDNA, mRNA sequence.
DN554125.1:226-245
GGAAAATTCCAATCGCCGCCGACCTCAGCC226CTGACCCCAGCAGTTCAAGTACATGACTTTTTGGATAGACTCGTCGGCCT
IC0AAA96AA05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY298597.1:338-357
TCTCTTGACTTGGATCAGACTTGATCAGAC338CTGACCCCAGCAGTTCAAGTACATGACTCGGCGGAGAGACTCGTCCGTTT
IC0AAA96AA05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA96AA05, mRNA sequence.
FC912579.1:338-357
TCTCTTGACTTGGATCAGACTTGATCAGAC338CTGACCCCAGCAGTTCAAGTACATGACTCGGCGGAGAGACTCGTCCGTTT
Prunus persica mRNA, clone: M0406.
HX869202.1:227-246
GGAAAATTCCAATCGCCGCCGACCTCAGCC227CTGACCCCAGCAGTTCAAGTACATGACTTTTTGGATAGACTCGTCGGCCT
Khaya senegalensis isolate HCNGB_00002341 chromosome 2.
CP135542.1:10597384-10597403
CTGCGTGCTTTTAATTGAATCATCTCAACC10597384CTGACCCCAGCAGTTCAAGTACATGACTTGCCGGAGAGATTCATCCGATT
UNVERIFIED: Citrus maxima clone 81-1 mRNA sequence, sequence.
KR492181.1:171-190
TCTCTTGACTTGGATCAGACTTGATCAGAC171CTGACCCCAGCAGTTCAAGTACATGACTCGGCGGAGAGACTCGTCCGTTT
Comarum palustre genome assembly, chromosome: 1.
OX637572.1:5317556-5317575
GGAAAGTCCCAATCTCCGGCGACCTTAGCC5317556CTGACCCCAGCAGTTCAAGTACATGACTCGCTGCAGAGACTCATCGGACT
Verbena officinalis genome assembly, chromosome: 5.
OY292389.1:23897814-23897833
ACTACGTTACCCTTCATAATCAACTCAGCT23897814CTGACCCCAGCAGTTCAAGTACATAACTTGGCGGAGAGAATCGTCGGATT
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:16224327-16224346
TCTCTTGACTTGGATCAGACTTGATCAGAC16224327CTGACCCCAGCAGTTCAAGTACATGACTCGGCGGAGAGACTCGTCCGTTT
Verbascum thapsus genome assembly, chromosome: 13.
OY770116.1:13746707-13746726
TACCCCTCTCCGTGCACCTGAATTTCAGCT13746707CTGACCCCAGCAGTTCAAGTACATGACTCGGTGGAGTGAATCTTCCGCCT
Umbilicus rupestris genome assembly, chromosome: 1.
OY787605.1:2810978-2810997
AAAAAAGATGGAACCTTTACATCATCAGTT2810978CTGACCCCAGCAGTTCAAGTACATGACTTGCCTCAAGGAATCCTCAGATT
Prunus persica EST, clone P1-18A08.
AJ872414.1:311-330
AGGCCGACGAGTCTATCCAAAAAGTCATGT311ACTTGAACTGCTGGGGTCAGGGCTGAGGTCGGCGGCGATTGGAATTTTCC
GF-FV-P3C3 Marsh grapefruit young flavedo Citrus x paradisi cDNA, mRNA sequence.
BE208883.1:331-350
AAACGGACGAGTCTCTCCGCCGAGTCATGT331ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCNAGTCAAGAGA
UCRCS01_02db10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02db10, mRNA sequence.
CB291369.1:345-364
AAACGGACGAGTCTCTCCGCCGAGGCATGT345ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
UCRCS01_05df03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05df03, mRNA sequence.
CB293309.1:339-358
AAACGGACGAGTCTCTCCGCCGAGTCATGT339ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
fc2728.e Rose Petals (Fragrant Cloud) Lambda Zap Express Library Rosa hybrid cultivar cDNA clone fc2728.e 5', mRNA sequence.
CF349691.1:301-320
AGTCCGATGAGTCTCTGCAGCGAGTCATGT301ACTTGAACTGCTGGGGTCAGGGATGATGAGGTCGCCGGAGATTGGGGTTT
USDA-FP_6471 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H08 5', mRNA sequence.
CK740327.1:337-356
AAACGGACGAGTCTCTCCGCCGAGTCATGT337ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
CGF1004520_C03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_C03 5', mRNA sequence.
CK936611.1:351-370
AAACGGACGAGTCTCTCCGCCGAGTCATGT351ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
CGF1004520_B09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_B09 5', mRNA sequence.
CK936628.1:346-365
AAACGGACGAGTCTCTCCGCCGAGTCATGT346ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
CGF1004476_B02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IIF_B02 5', mRNA sequence.
CK938253.1:345-364
AAACGGACGGGTCTCTCCGCCGAGTCATGT345ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
C06007F05SK FlavCurFr1 Citrus clementina x Citrus tangerina cDNA clone C06007F05, mRNA sequence.
CX298009.1:276-295
AAACGGACGAGTCTCTCCGCCGAGTCATGT276ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
UCRPT02_19D12_g Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-19D12-G24-1-5.g, mRNA sequence.
CX636333.1:281-300
AAACGGACGAGTCTCTCCGCCGAGTCATGT281ACTTGAACTGCTGGGGTCAGGTCTAATCAAGTCTGATCCAAGTCAAGAGA
PP_YEa0020G06 Peach developing fruit mesocarp Stage S4 Prunus persica cDNA clone PP_YEa0020G06 5', mRNA sequence.
DN677031.1:331-350
AGGCCGACGAGTCTATCCAAAAAGTCATGT331ACTTGAACTGCTGGGGTCAGGGCTGAGGTCGGCGGCGATTGGAATTTTCC
USDA-FP/ARO_15144 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-22_G11 5', mRNA sequence.
DN959314.1:322-341
AAACGGACGAGTCTCTCCGCCGAGTCATGT322ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
KN0AAL3DA09FM1 KCl-Salt1 Citrus reshni cDNA 5', mRNA sequence.
DY306812.1:328-347
AAACGGACGAGTCTCTCCGCCGAGTCATGT328ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
KN0AAA3AD03ZM1 AbsAOv1 Citrus clementina cDNA 5', mRNA sequence.
EH406066.1:53-72
AAACGGACGAGTCTCTCCGCCGAGTCATGT53ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
Volcani_8_10_F2 Volcani08 Citrus reticulata x Citrus temple cDNA, mRNA sequence.
EX447630.1:365-384
AAACGGACGAGTCTCTCCGCCGAGTCATGT365ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
CS00-C1-101-030-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY661221.1:278-297
AAACGGACGAGTCTCTCCGCCGAGTCATGT278ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
CS00-C5-003-035-A12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY746552.1:327-346
AAACGGACGAGTCTCTCCGCCGAGTCATGT327ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
CS00-C5-003-054-E06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY748181.1:328-347
AAACGGACGAGTCTCTCCGCCGAGTCATGT328ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCACAGTCAAGAGA
PT11-C2-300-077-A03-CT.F Poncirus trifoliata bark, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY833509.1:344-363
AAACGGACGAGTCTCTCCGCCGAGTCATGT344ACTTGAACTGCTGGGGTCAGGTCTAATCAAGTCTGATCCAAGTCAACAGA
PT11-C2-301-044-C01-CT.F Poncirus trifoliata bark, infected with Phytophthora parasitica Citrus trifoliata cDNA, mRNA sequence.
EY836225.1:63-82
AAACGGACGAGTCTCTCCGCCGAGTCCTGT63ACTTGAACTGCTGGGGTCAGGTCTAATCAAGTCTGATCCAAGTCAAGAGA
PP1009G04-T7 PP1 Prunus persica cDNA clone PP1009G04, mRNA sequence.
FC861249.1:342-361
AGGCCGACGAGTCTATCCAAAAAGTCATGT342ACTTGAACTGCTGGGGTCAGGGCTGAGGTCGGCGGCGATTGGAATTTTCC
KN0AAA3AD03ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA3AD03, mRNA sequence.
FC871086.1:56-75
AAACGGACGAGTCTCTCCGCCGAGTCATGT56ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
C31303B04EF CTVMacrop1 Citrus macrophylla cDNA clone C31303B04, mRNA sequence.
FC875900.1:346-365
AAACGGACGAGTCTCTCCGCCGAGTCATGT346ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
KN0AAL3DA09FM1 KCl_Salt1 Citrus reshni cDNA clone KN0AAL3DA09, mRNA sequence.
FC918978.1:328-347
AAACGGACGAGTCTCTCCGCCGAGTCATGT328ACTTGAACTGCTGGGGTCAGGTCTGATCAAGTCTGATCCAAGTCAAGAGA
Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:18523812-18523831
AGGCCGACGAGTCTATCCAAAAAGTCATGT18523812ACTTGAACTGCTGGGGTCAGGGCTGAGGTCGCCGGCGATTGGAATTTTCC
Swietenia macrophylla isolate HCNGB_00002344 chromosome 1.
CP135559.1:11123375-11123394
AATCTGACGCGTCTCTCCGGCAAGTCATGT11123375ACTTGAACTGCTGGGGTCAGGGTTGAGATGATTCAATTAAAAGCGTGCAG
Potentilla anserina genome assembly, chromosome: 6.
OW176986.1:32859826-32859845
AGTCCGATGAGTCTCTGCAGCGAGTCATGT32859826ACTTGAACTGCTGGGGTCAGGGTTAAGGTCGTCGCACTGCCGGACATCGT
Rosa rugosa genome assembly, chromosome: 1.
OY288191.1:64514340-64514359
AGTCCGATGAGTCTCTGCAGCGAGTCATGT64514340ACTTGAACTGCTGGGGTCAGGGATGATGAGGTCGCCGGAGATTGGGGTTT
Umbilicus rupestris genome assembly, chromosome: 4.
OY787608.1:562592-562611
AAAGTGAGGAGTCGTTGCGGCAAGTCATGT562592ACTTGAACTGCTGGGGTCAGAACTGAGAAAAGGTTCCACCTTTTTTGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGACCCCAGCAGTTCAAGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGACCCCAGCAGTTCAAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.629 | 0.620 | search_plus_done; http://172.18.8.135:50400/match?q=CTGACCCCAGCAGTTCAAGT&k=0&no_gap=0&offset=0&limit=50
2.106 | 1.477 | search_minus_done; http://172.18.8.135:50400/match?q=ACTTGAACTGCTGGGGTCAG&k=0&no_gap=0&offset=0&limit=33
2.126 | 0.020 | cgi_end;

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