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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:13:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Myripristis murdjan genome assembly, chromosome: 15.
LR597564.1:8793872-8793891
TCCATGTGATATTGACTCATCAATGATGAA8793872CTGAGCCATAAACACGAGCACAAACATCCTGGGTTCTCTAACTCTCCCCT
Fragaria x ananassa cultivar Benihoppe chromosome 12.
CP139764.1:28018410-28018429
TGCATAAGCACTGTGGCAACAGACTCTCCT28018410CTGAGCCATAAACACGAGCAGTGTTTCCAGGTGCATAAGTTCCCAGAGAT
Fragaria x ananassa cultivar Benihoppe chromosome 10.
CP139766.1:30059485-30059504
TGCATAAGCACTGTGGCAACAGACTCTCCT30059485CTGAGCCATAAACACGAGCAGTGTTTCCAGGTGCATAAGTTCCCAGAGAT
Fragaria x ananassa cultivar Benihoppe chromosome 9.
CP139767.1:29188936-29188955
TGCATAAGCACTGTGGCAACAGACTCTCCT29188936CTGAGCCATAAACACGAGCAGTGTTTCCAGGTGCATAAGTTCCCAGAGAT
Comarum palustre genome assembly, chromosome: 2.
OX637573.1:31451437-31451456
TGCATAAGCACTGTGGCAACAGACTCTCCT31451437CTGAGCCATAAACACGAGCAGTGTTCCCAGGTGCATATGTTCCCAGAGAT
Comarum palustre genome assembly, chromosome: 11.
OX637582.1:1582808-1582827
TACATAAGCACTGTAGCAACAGACTCTCCT1582808CTGAGCCATAAACACGAGCAGTATTTCCAGGTGCATAAGTTGCCAGAGAT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38508181-38508200
TGCATAAGCATTGTGGCAATAGACTCTCCT38508181CTGAGCCATAAACACGAGCAGTATTTCCAGGGGCATAAGTCCCCAGGGAT
TSA: Pyrus x bretschneideri Unigene60304_XinShao mRNA sequence.
JR648521.1:188-207
ATCCCTGGGGACTTATGCCCCTGGAAGTAC188TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCGCAATGCTTATGCA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2547274-2547293
ATCCCTGGGGACTTATGCCCCTGGAAATAC2547274TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2621962-2621981
ATCCCTGGGGACTTATGCCCCTGGAAATAC2621962TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2701664-2701683
ATCCCTGGGGACTTATGCCCCTGGAAATAC2701664TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2692236-2692255
ATCCCTGGGGACTTATGCCCCTGGAAATAC2692236TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2608540-2608559
ATCCCTGGGGACTTATGCCCCTGGAAATAC2608540TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2621840-2621859
ATCCCTGGGGACTTATGCCCCTGGAAATAC2621840TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2716238-2716257
ATCCCTGGGGACTTATGCCCCTGGAAATAC2716238TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2704497-2704516
ATCCCTGGGGACTTATGCCCCTGGAAATAC2704497TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2781509-2781528
ATCCCTGGGGACTTATGCCCCTGGAAATAC2781509TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2821461-2821480
ATCCCTGGGGACTTATGCCCCTGGAAATAC2821461TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2765722-2765741
ATCCCTGGGGACTTATGCCCCTGGAAATAC2765722TGCTCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCACAATGCTTATGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGAGCCATAAACACGAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGAGCCATAAACACGAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.214 | 0.205 | search_plus_done; http://172.18.8.135:50400/match?q=CTGAGCCATAAACACGAGCA&k=0&no_gap=0&offset=0&limit=50
0.325 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTCGTGTTTATGGCTCAG&k=0&no_gap=0&offset=0&limit=43
0.334 | 0.008 | cgi_end;

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