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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:10:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys percivali genome assembly, chromosome: 12.
OU015753.1:32899515-32899534
CATGGCCAGGGTCACATTGCCAGGTCGCTG32899515CTGAGCTAATGCAAGAAGCACACCCTCTATGAATTTAAGTGTTCTCCACT
Nesoenas mayeri genome assembly, chromosome: Z.
OY720060.1:24967944-24967963
CTTAAGCCTGTTCAACAAGGCTCTGTGTAT24967944CTGAGCTAATGCAAGAAGCATAATAAAACCTTTCAAGGAAACTCACAATC
Sequence 19945 from patent US 7557201.
GP488948.1:84-103
AAGGCAATTTGTCAATGGCAAGGCCGCTAG84CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTCACCCGA
Sequence 3452 from Patent WO2010046221.
HC746361.1:1586-1605
ACAACAATTCGTCATTGGCAAAGGCTTTAT1586CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTGTCACGT
Sequence 1284 from patent US 8937215.
HK371922.1:1776-1795
ACAACAACACATCAATGGCCAAGCCACTGG1776CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
Sequence 1284 from patent US 9574200.
KH564476.1:1776-1795
ACAACAACACATCAATGGCCAAGCCACTGG1776CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
Sequence 1284 from patent US 10227607.
MM771475.1:1776-1795
ACAACAACACATCAATGGCCAAGCCACTGG1776CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
Sequence 1284 from patent US 10883115.
MX197641.1:1776-1795
ACAACAACACATCAATGGCCAAGCCACTGG1776CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
Sequence 1284 from patent US 11530418.
OO986152.1:1776-1795
ACAACAACACATCAATGGCCAAGCCACTGG1776CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
CAB40006_IIIa_Fa_H08 Cabernet Sauvignon Berry - CAB4 Vitis vinifera cDNA clone CAB40006_IIIa_Fa_H08 5', mRNA sequence.
CB978582.1:744-763
ACAACAACTCGTCATTGGCAAAGGCTTTAT744CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTGTCACGT
GR__Eb01M14.f GR__Eb Gossypium raimondii cDNA clone GR__Eb01M14 5', mRNA sequence.
CO117778.1:520-539
AAGGCAATTTGTCAATGGCAAGGCCGCTAG520CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTCACCCGA
Theobroma cacao, mRNA sequence (KZ0AAS8YJ23FM1).
CU549868.1:186-205
AGGGCAATCTGTCACTGGCAAGGCCACTAG186CTGAGCTAATGCAAGAAGCAAATCAAGGGGTACCTGCATGGCTCACCCGT
Brassica rapa subsp. pekinensis mRNA, clone: BRest05-O05, 5'-end sequence.
DC845295.1:307-326
ACAACAACACATCAATGGCCAAGCCACTAG307CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTTAGTCGG
S9B08658 Ripening Berries (VvS9) Vitis vinifera cDNA clone S9B08658, mRNA sequence.
EE101056.1:465-484
ACAACAACTCGTCATTGGCAAAGGCTTTAT465CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTGTCACGT
BNSCS5CT_UP_025_H07_21JAN2005_049 Brassica napus seed coat BNSCS5CT Brassica napus cDNA 5', mRNA sequence.
EE472528.1:291-310
ACAACAACACATCAATGGCCAAGCCACTAG291CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTTAGTCGG
UFL_631_25 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES806115.1:778-797
AAGGCAATTTGTCAATGGCAAGGCCACTAG778CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTTACCCGA
UFL_200_13 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES810501.1:447-466
AATGATATTTGTCAATGGCAACGCCGCTAG447CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTCACCCTA
UFL_252_72 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES816004.1:21-40
GGCACGAGCAAGGCCACTAG21CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTTACCCGA
0163114 Brassica napus Flower Brassica napus cDNA, mRNA sequence.
EV130945.1:278-297
ACAACAACACATCAATGGCCAAGCCACTAG278CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTTAGTCGG
ERibbud01_SQ03_K5_K05_011 Ribes nigrum Ben Hope pooled bud (SCRI_Rn_bud_cDNA) Ribes nigrum cDNA, mRNA sequence.
GT027279.1:196-215
AAAACAATTCCTCAATGGCAAGGCCATTAT196CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCATGGCTCGGTCGG
D03-16-D03 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK794582.1:376-395
AAGGCAATTTGTCAATGGCAAGGCCGCTAG376CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTCACCCGA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_4230.
FX752689.1:239-258
ACAACAACACATCAATGGCCAAGCCACTAG239CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTTAGTCGG
TSA: Vitis vinifera Locus_1042_Transcript_8/9_Confidence_0.556.Vivi mRNA sequence.
KA163666.1:1935-1954
ACAACAACTCAGCATTGGCAAAGGCTTTAT1935CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTGTCACGT
AL_NL076K22.F AL_NL Arabidopsis lyrata genomic 5', genomic survey sequence.
HN209888.1:447-466
ACAACAACACATCAATGGCCAAGCCACTGG447CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
AL_NL074L13.R AL_NL Arabidopsis lyrata genomic 3', genomic survey sequence.
HN216398.1:438-457
ACAACAACACATCAATGGCCAAGCCACTGG438CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
AL_NL080J15.F AL_NL Arabidopsis lyrata genomic 5', genomic survey sequence.
HN234496.1:435-454
ACAACAACACATCAATGGCCAAGCCACTGG435CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
GH_TBh041P05r Gossypium hirsutum TM-1 BAC library Gossypium hirsutum genomic, genomic survey sequence.
KO258336.1:592-611
AAGGCAATTTGTCAATGGCAAGGCCACTAG592CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCT
Gossypium turneri isolate D10-2 chromosome D10_01.
CP032571.1:3610328-3610347
AAGGCAATTTGTCAATGGCAAGGCCGCTAG3610328CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTAACCCGA
Vitis rotundifolia cultivar Noble chromosome 6.
CP092931.1:805976-805995
ACAACAACTCGTCATTGGCAAAGGCTTTAT805976CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTGTCACGT
Camelina hispida cultivar hispida voucher DAO 902780 chromosome 2.
CP094632.1:34058994-34059013
ACAACAACACATCAATGGCCAAGCCACTGG34058994CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTAACTCGA
Gossypium herbaceum isolate Zhongcao1 chromosome 1.
CP106687.1:4396646-4396665
AAGGCAATTTGTCAATGGCAAGGCCACTAG4396646CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTTACCCGA
Vitis vinifera cultivar Pinot Noir 40024 chromosome 6.
CP126653.1:1020212-1020231
ACAACAATTCGTCATTGGCAAAGGCTTTAT1020212CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTGTCACGT
Vitis x doaniana cultivar PI 588149 chromosome 6.
CP128351.1:970252-970271
ACAACAACTCGTCATTGGCAAAGGCTTTAT970252CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTGTCACGT
Camelina sativa cultivar CO46 chromosome 4.
CP131553.1:25796253-25796272
ACAACAACACATCAATGGCCAAGCCACTGG25796253CTGAGCTAATGCAAGAAGCAAACCAAGAGGTCCCTGACTGGCTAACTCGA
Camelina sativa cultivar CO46 chromosome 6.
CP131555.1:21757439-21757458
ACAACAACACATCAATGGCCAAGCCACTGG21757439CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTAACTCGA
Camelina sativa cultivar CO46 chromosome 9.
CP131558.1:33335113-33335132
ACAACAACACATCAATGGCCAAGCCACTGG33335113CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTAACTCGA
Theobroma grandiflorum isolate C1074 chromosome 5.
CP142128.1:14945611-14945630
AGGGCAATTTGTCACTGGCAAGGCCGCTAG14945611CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTCACCCGT
Capsella bursa-pastoris isolate WGS_leaf chromosome 5.
CP144187.1:15820123-15820142
ACAACAACACATCAATGGCCAAACCACTGG15820123CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTTACTCGA
Capsella bursa-pastoris isolate WGS_leaf chromosome 13.
CP144195.1:18632781-18632800
ACAACAACACATCAATGGCCAAACCACTGG18632781CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTTACTCGA
Vitis vinifera clone SS0AAG19YP02.
FQ384608.1:1164-1183
ACAACAACTCGTCATTGGCAAAGGCTTTAT1164CTGAGCTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTGTCACGT
Gossypium hirsutum clone NBRI_TRANS-639 microsatellite sequence.
JX964370.1:757-776
AAGGCAATTTGTCAATGGCAAGGCCACTAG757CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTTACCCGA
Arabidopsis arenosa genome assembly, chromosome: 5.
LR999455.1:14493834-14493853
ACAACAACACATCAATGGCCAAGCCTCTGG14493834CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
Arabis alpina genome assembly, chromosome: 5.
LT669792.1:24656950-24656969
ATAACAACACATCAATGGCCAAACCACTCG24656950CTGAGCTAATGCAAGAAGCAAACCAAGAGGTTCCTGACTGGCTGACTCGA
Theobroma cacao genome assembly, chromosome: 5.
OY284442.1:10596195-10596214
AGGGCAATCTGTCACTGGCAAGGCCACTAG10596195CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTCACCCGT
Theobroma cacao genome assembly, chromosome: 5.
OY284462.1:10580979-10580998
AGGGCAATCTGTCACTGGCAAGGCCACTAG10580979CTGAGCTAATGCAAGAAGCAAATCAAGAGGTACCTGCATGGCTCACCCGT
Hibiscus tridactylites genome assembly, chromosome: 4.
OY288268.1:25580669-25580688
AAGGGAATTCGTCATTGGCAAGGCCGCTAG25580669CTGAGCTAATGCAAGAAGCAAGTCAAGAGGTACCTGCGTGGCTCACCCGA
Hibiscus tridactylites genome assembly, chromosome: 9.
OY288273.1:83955347-83955366
AAGGCAATTCGTCGTTGGCAAGGCCGCTAG83955347CTGAGCTAATGCAAGAAGCAAGTCAAGAGGTTCCTGCGTGGCTCACCCGA
Cardamine flexuosa genome assembly, chromosome: 5.
OY743218.1:22315667-22315686
AAAACAACACATCAATGGCCAAGCCACTCG22315667CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
Barbarea vulgaris genome assembly, chromosome: 2.
OY763888.1:31449896-31449915
ACAACAACACATCAATGGCCAAGCCACTCG31449896CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGACTCGA
Spergularia marina genome assembly, chromosome: 16.
OY804559.1:19781313-19781332
AAAACAACTCGTCACTAGCAAGACCACTGG19781313CTGAGCTAATGCAAGAAGCAAACCAGGAAGTGCCAGAGTGGCTACAGCGT
Cardamine chenopodiifolia genome assembly, chromosome: 5.
OZ000463.1:16560007-16560026
ACAACAACACATCAATGGCCAAGCCACTCG16560007CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTAACTCGA
Cardamine chenopodiifolia genome assembly, chromosome: 21.
OZ000479.1:15361659-15361678
ACAACAACACATCAATGGCCAAGCCACTCG15361659CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTAACTCGA
Cardamine chenopodiifolia genome assembly, chromosome: 29.
OZ000487.1:13711875-13711894
ACAACAACACATCAATGGCCAAGCCACTCG13711875CTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTAACTCGA
Myrica gale genome assembly, chromosome: 6.
OZ005603.1:2458032-2458051
AAAACAATTCGTCATTGGCAAGGCCACTGG2458032CTGAGCTAATGCAAGAAGCAAATCAGGAAGTACCTGCTTGGCTTACACGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGAGCTAATGCAAGAAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGAGCTAATGCAAGAAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.274 | 1.265 | search_plus_done; http://172.18.8.135:50400/match?q=CTGAGCTAATGCAAGAAGCA&k=0&no_gap=0&offset=0&limit=50
1.414 | 0.140 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTTCTTGCATTAGCTCAG&k=0&no_gap=0&offset=0&limit=0
1.414 | 0.000 | cgi_end;

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