GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 15:32:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

metagenome genome assembly, chromosome: 1.
OW818666.1:3777436-3777454
TTATAGTAAGTACTGATAGATTGCTTTTTA3777436CTGAGTCACAGACGCGGTTCAGATAGAATGACACCGGTTTATGAGCCAT
Porphyra yezoensis cDNA, clone:PFL056h07_r, 5'end.
AU194221.1:56-74
CCGCTACTGCCGCCGCTGCGGCGGCTGCGG56CTGAGTCACAGACGCGGTTACAGCAGCAGCAGCAGTAGCAGCAGCATCA
Anthocharis cardamines genome assembly, chromosome: 15.
FR989965.1:9765824-9765842
TCGAACCCAGGACCTCTGGTTTGCATACCA9765824CTGAGTCACAGACGCGGTTAAATCAATTGTTAATTTAGTCTTATTAAAC
Diabrotica virgifera virgifera genome assembly, chromosome: 5.
OU830628.1:65743548-65743566
ATTTTGATCCAAAGGTAGACGCTCTTACCA65743548CTGAGTCACAGACGCGGTTGATATCATCATTAAAATTAATGTACATATG
Blastomussa wellsi genome assembly, chromosome: 5.
OX393565.1:25700307-25700325
TTTTGATGTCATGAAATTGGGTCGATTGGA25700307AACCGCGTCTGTGACTCAGTAGACATCCCAGGTTCCCTTTAAGTAAGGG
Cetonia aurata genome assembly, chromosome: 1.
OX421882.1:55894528-55894546
GCATCCATCATGGCCGTCTATATAATACCA55894528AACCGCGTCTGTGACTCAGGATGTGGTAAACTCGGCGAATTTAGCGGGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGAGTCACAGACGCGGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGAGTCACAGACGCGGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.346 | 0.337 | search_plus_done; http://172.18.8.135:50400/match?q=CTGAGTCACAGACGCGGTT&k=0&no_gap=0&offset=0&limit=50
0.439 | 0.094 | search_minus_done; http://172.18.8.135:50400/match?q=AACCGCGTCTGTGACTCAG&k=0&no_gap=0&offset=0&limit=46
0.440 | 0.001 | cgi_end;

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